Gene Information

Name : kdpB (SM2011_a2331)
Accession : YP_007573224.1
Strain :
Genome accession: NC_020527
Putative virulence/resistance : Unknown
Product : KdpB potassium-transporting ATPase B chain
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.12
Position : 1298697 - 1300739 bp
Length : 2043 bp
Strand : -
Note : corresponds to SMa2331

DNA sequence :
ATGTCAAACAAACCCACGACTCCGAACCTCGTCGACCCGAAAATACTCTTCCCGGCAGCAAAGGCCGCGTTCGTCAAGCT
TGATCCGCGCCAGCTCGTCCGCAATCCGGTGATCTTCGTCACCGAAGCCATGGCGGCATTGGTGACCCTCTTCTTCGTTC
TCGATGTGGCAACCGGTGGCGGCAGCCGGCTCTTCTCGGGCCAGATCGCCGCCTGGCTATGGTTCACCGTGCTCTTCGCC
ACGTTCGCTGAAGCCGTTGCCGAGGGTCGCGGCAAGGCGCAGGCCGACTTCCTCCGCCATACCAAATCGGAGCTCAGCGC
CCGCAAGCTTGTCGCGCCCGAGGGTCGGGAGACCAAGGAAATCCCCGCGACCATGCTGAAGGTCGGGGATCTCGTCCTTG
TCCAGGCCGGCGAATTGATCCCGGGCGACGGCGAAGTCGTAGAAGGGGTCGCCTCGGTCAACGAGAGCGCGATTACGGGC
GAATCGGCGCCGGTGATCCGCGAAGCGGGCGGCGATCGCTCCGCCGTCACCGGCGGTACCGAAGTGCTTTCGGACTGGGT
CAAGGTCCGCATCACGACCGCCCCCGGTTCCACCTTCGTCGACCGCATGATCGCGCTCATCGAAGGGGCGCAGCGGCAGA
AGACGCCGAACGAGATTGCGCTGTCGATCCTGCTTTCCGGTTTGACGTTGATCTTCCTGATCGCCGTGGTGACGCTCTGG
GGCCTTGCTAGCTATTCAGCGACCGTGCTTTCGGTGACCGTGCTTTCCGCCCTGCTTGTCACGCTGATCCCGACGACCAT
CGGCGGATTGCTTTCGGCGATCGGCATCGCCGGCATGGACCGGCTGGTGCGCTTCAACGTGATCGCCACCTCCGGCCGTG
CCGTCGAGGCTGCGGGGGACGTTGACACGCTGCTCCTCGACAAGACGGGGACGATCACCTTCGGCAACCGCATGGCAAGC
GACTTCCTGCCCGTGCCGGGCGTAACAGTGGAGGAGCTCGCCGATGCGGCGCTCCTCGCAAGCCTTGCCGACGAGACACC
GGAAGGCCGCTCCATCGTGGCGCTCGCCACCGGCGAGTTCGGGCGCGGGGCGTCGCAGACCGGGATCGATGCGGTCGTGC
CCTTTACCGCGGAAACCCGGTTGTCCGGCGTCGATCACCGCGGCCGCCGGCTGCGCAAGGGCGCGGTCGACTCGGTTCTG
AGATTTGCCGGCCTGTCCGACAGCAAGATCCCCCAGGAATTCAGGCAGGCGGTCGACAAGGTCGCCCGAACCGGCGGCAC
GCCGCTCGCCGTGGCCGATGGCAACCGGCTGCTTGGCGTGGTCCACCTGAAGGACGTCGTCAAGCCCGGGATCAAGGAGC
GCTTCTCCGAATTACGCGCGATGGGCATCCGCACGGTAATGGTAACCGGTGACAACCCGATCACTGCCGCGGCAATCGCC
TCGGAGGCCGGCGTCGACGATTTCCTCGCCGAAGCGACACCGGAAGACAAGCTCGCCTATATCCGAAAGGAACAGAACGG
CGGCCGGCTGATTGCTATGTGCGGCGACGGCACCAATGATGCGCCGGCGCTCGCCCAGGCGGATGTGGGCGTCGCCATGC
AGACCGGCACCCAAGCGGCCCGCGAAGCGGCGAACATGGTGGACCTCGATTCGAGCCCGACGAAGCTGATCGAGATCGTC
GAGATCGGCAAGCAATTGCTGATGACGCGTGGTTCTCTCACGACCTTCTCGATCGCCAACGACGTGGCGAAATACTTCGC
CATCATCCCGGCGCTCTTCGTCACCACCTATCCGGCACTCGGCGTGCTTAACATTATGGGCTTGGCGTCACCGCAGTCGG
CTATCCTGTCGGCCGTCATCTTCAACGCGCTGATCATCGTGGCGCTCATTCCGCTGGCATTGAAAGGCGTCAGGTACCGT
CCCGTCGGCGCGGCAGCCCTGCTTCGCGGCAATCTCCTCGTCTACGGCCTCGGCGGCCTGGTCCTGCCTTTCGCTGGGAT
CAAGCTGATCGACCTTGCCGTCTCGAACCTCAACCTGGTGTGA

Protein sequence :
MSNKPTTPNLVDPKILFPAAKAAFVKLDPRQLVRNPVIFVTEAMAALVTLFFVLDVATGGGSRLFSGQIAAWLWFTVLFA
TFAEAVAEGRGKAQADFLRHTKSELSARKLVAPEGRETKEIPATMLKVGDLVLVQAGELIPGDGEVVEGVASVNESAITG
ESAPVIREAGGDRSAVTGGTEVLSDWVKVRITTAPGSTFVDRMIALIEGAQRQKTPNEIALSILLSGLTLIFLIAVVTLW
GLASYSATVLSVTVLSALLVTLIPTTIGGLLSAIGIAGMDRLVRFNVIATSGRAVEAAGDVDTLLLDKTGTITFGNRMAS
DFLPVPGVTVEELADAALLASLADETPEGRSIVALATGEFGRGASQTGIDAVVPFTAETRLSGVDHRGRRLRKGAVDSVL
RFAGLSDSKIPQEFRQAVDKVARTGGTPLAVADGNRLLGVVHLKDVVKPGIKERFSELRAMGIRTVMVTGDNPITAAAIA
SEAGVDDFLAEATPEDKLAYIRKEQNGGRLIAMCGDGTNDAPALAQADVGVAMQTGTQAAREAANMVDLDSSPTKLIEIV
EIGKQLLMTRGSLTTFSIANDVAKYFAIIPALFVTTYPALGVLNIMGLASPQSAILSAVIFNALIIVALIPLALKGVRYR
PVGAAALLRGNLLVYGLGGLVLPFAGIKLIDLAVSNLNLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 5e-144 61
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 4e-144 61
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 3e-128 55
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-128 55
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-128 55
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-128 55
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-128 55
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 3e-129 55