Gene Information

Name : SM2011_a1745 (SM2011_a1745)
Accession : YP_007572920.1
Strain :
Genome accession: NC_020527
Putative virulence/resistance : Virulence
Product : ABC transporter,permease,Fe3+-siderophore transport system
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 985278 - 986324 bp
Length : 1047 bp
Strand : -
Note : corresponds to SMa1745

DNA sequence :
ATGACCGCCGGGATTATCAAGACATCGGACGGGCGTTGGTCGCCCGTGTCCCGTTCCAACAGAATGCGAAGTCTTTGGCT
TGCAGCGCTTTTCGCGCTCGTGATCGTCTTGCTTGCCGCCTCCGTTACGGTCGGCACGCGCAATGTCGGGTGGGACGATG
TCGCCGCGGCAATGGGCGGTGCACAGAATAACATCGATCGCGCGTCGGTTGCTTTGCGCATTCCGCGGACCGTGTTGGCC
CTGCTTGCCGGGGGCGCTCTCGGCTTGGCCGGAGCGATCATGCAAGGCGTGACACGCAATCCGCTTGCGGATCCCGGCAT
TCTCGGCGTCAACATGGGGGCATCTCTCGCGGTCGTCGTCGGCGTCGCCTGGTTCGGGATGTCGTCGTTATATGCGTACA
TCTGGGTGGCGATCCTGGGTGCCGGATGCGCCGCGATCTTCGTCTACGCCATAGGTTCGCTGGGCAGAGGCGGCGCGACC
CCTCTGAAAATGGCGCTCGCAGGGGCGGCAACGTCGGTCGCATTTGCGTCCATGGTTATCGCCGTCGTGCTGCCGCGTGG
CGATATTGCAGGCGGTATTCATTCCTGGCAGATCGGTGGTGTTGGCGGCGCGACTTACGAGCGGATCCTTCCCGTATTGC
CGTTTCTGCTTGTAGGATTCGTGATCAGCCTGTTGTCGGCCAGAAAACTCAACTCTCTTGCACTCGGTGACGAGCTGGCG
ACCGGGCTCGGCGAAAGCGTCGCAACCGCGCGCGCCGTTGCTTCCCTCGGCGCCATCCTTCTCTGCGGTGCGACGACCGC
CATATGCGGGCCGATCGGCTTTCTCGGGCTGGTCGTACCACATCTCTGCCGCCTCTTGGTTGGCGTGGACCATCGGTGGC
TGCTGCCTTTTTCGACGCTCGCAGGCGCGTGTCTCCTGCTCGCGGCGGACGTTCTCGGGCGAATCGTCGCGCGCCCCGCA
GAGATCGACGTAGGCATCGTCACCGCGATGATCGGTGCGCCATTCTTCATCTGGATCGTCCGGCGCCAGCGTGTGAGGGA
CCTGTGA

Protein sequence :
MTAGIIKTSDGRWSPVSRSNRMRSLWLAALFALVIVLLAASVTVGTRNVGWDDVAAAMGGAQNNIDRASVALRIPRTVLA
LLAGGALGLAGAIMQGVTRNPLADPGILGVNMGASLAVVVGVAWFGMSSLYAYIWVAILGAGCAAIFVYAIGSLGRGGAT
PLKMALAGAATSVAFASMVIAVVLPRGDIAGGIHSWQIGGVGGATYERILPVLPFLLVGFVISLLSARKLNSLALGDELA
TGLGESVATARAVASLGAILLCGATTAICGPIGFLGLVVPHLCRLLVGVDHRWLLPFSTLAGACLLLAADVLGRIVARPA
EIDVGIVTAMIGAPFFIWIVRRQRVRDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 5e-48 46
SP_1033 NP_345508.1 iron ABC transporter permease Virulence PPI-1 Protein 5e-48 46
fecD AAL08452.1 FecD Virulence SRL Protein 5e-22 42
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 2e-20 42
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 2e-20 42
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 2e-20 42
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 2e-20 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SM2011_a1745 YP_007572920.1 ABC transporter,permease,Fe3+-siderophore transport system VFG0926 Protein 2e-33 47
SM2011_a1745 YP_007572920.1 ABC transporter,permease,Fe3+-siderophore transport system VFG1043 Protein 3e-22 42
SM2011_a1745 YP_007572920.1 ABC transporter,permease,Fe3+-siderophore transport system VFG0922 Protein 4e-27 41