Gene Information

Name : NJAUSS_0609 (NJAUSS_0609)
Accession : YP_007570564.1
Strain : Streptococcus suis SC070731
Genome accession: NC_020526
Putative virulence/resistance : Virulence
Product : Lantibiotic transport ATP-binding protein SrtF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 647901 - 648617 bp
Length : 717 bp
Strand : +
Note : -

DNA sequence :
ATGGAGGCAGAAAAAATGGAAGTTATCATTCAAAATCTAAGAAAAAGCTATAAAGACAAAGAGGTTTTAAAAGACGTTTC
ATTTAAAATTGAAGAAGGTACTATTTGTGGTCTTCTGGGAGTAAATGGGGCTGGGAAATCCACCATTATGAAAATTCTTT
TTGGGTTAGAAAGAGCTGATAGTGGAGAAGTCATTTTCAATGGAAAGCATAAGGATATTGTAGAAGAAAATAGATTTGAT
ATTGGAGCGTTGATAGAATCTCCTGCTATCTATTTGAATCTTTCTGCATTTGACAATTTAAAAACACGAGCATTGCTACA
TGATATTCCAGATGAAAGAATTTATGAGGTACTTCAGTTGGTTGGTTTATCTGATACTGGAAAAAAGAAGGCAGGGCACT
TTTCATTAGGAATGAAGCAACGACTTGGTTTAGGAATGGCAATTATTACCAATCCTGATTTATTAATTTTAGATGAGCCA
ACTAATGGTCTAGATCCAGATGGGATAAAAGAATTGCTAAATTTAATTAGGGATCTAAAAAAATCTGGAATGACAGTCCT
CTTGTCCAGCCATCAACTAAGTGAAGTCAGCAAAATTGCGGATCAAATCGTTATACTGAATCAGGGCAAGATTTTTTACG
ATGATATTAATAAGAATTCAAATGATTTAGAAAAACTATTCTTTAGAATTGTCCATGGAGGTGATGGAAATGACTAA

Protein sequence :
MEAEKMEVIIQNLRKSYKDKEVLKDVSFKIEEGTICGLLGVNGAGKSTIMKILFGLERADSGEVIFNGKHKDIVEENRFD
IGALIESPAIYLNLSAFDNLKTRALLHDIPDERIYEVLQLVGLSDTGKKKAGHFSLGMKQRLGLGMAIITNPDLLILDEP
TNGLDPDGIKELLNLIRDLKKSGMTVLLSSHQLSEVSKIADQIVILNQGKIFYDDINKNSNDLEKLFFRIVHGGDGND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 6e-40 46
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 4e-40 46
cdd4 CAA63569.1 - Not tested PaLoc Protein 1e-39 46
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 4e-36 44
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 4e-36 44
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 4e-36 44
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 4e-36 44
SSU05_0946 YP_001198312.1 hypothetical protein Not tested 89K Protein 2e-37 44
SSU98_0954 YP_001200512.1 hypothetical protein Not tested 89K Protein 2e-37 44
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 6e-35 42
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 1e-33 42
Spaf_1095 YP_006309897.1 ABC multidrug transporter Not tested FWisland_1 Protein 1e-36 41
SSU05_0910 YP_001198276.1 transport ATP-binding protein Not tested 89K Protein 2e-34 41
SSU98_0915 YP_001200473.1 transport ATP-binding protein Not tested 89K Protein 2e-34 41
glrA YP_004287007.1 spermidine/putrescine import ATP-binding protein potA Not tested Not named Protein 1e-23 41