Gene Information

Name : NJAUSS_0569 (NJAUSS_0569)
Accession : YP_007570524.1
Strain : Streptococcus suis SC070731
Genome accession: NC_020526
Putative virulence/resistance : Virulence
Product : Type IV secretory pathway, VirD4 component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 597531 - 599348 bp
Length : 1818 bp
Strand : +
Note : -

DNA sequence :
ATGTATTCTAGGCAAAAAGCATTTGTCTTTGGACTCTTGGGTCTTGCTTTTGGCTATTTCTGTCACCGTCTAACCCTACT
CTATGATAGTTTAACCAATGCCCCACCTATGGATCGTTTAGCCTACATCTTAGGAGAAGGGCTAAATCAAGTCTTCAATC
CTTTATGGCTTTTTACTTTTACTCAAAAATCTCTTCTTGCCTTTATCCTTGGGATTCTAACGATGATGTTAGTCTATCTT
TATGTATCGACAGGACAGAAGGTCTATCGAGAAGGGGAAGAATACGGTTCTGCCCGATTTGGAACCAGTAAGGAAAAGCG
ATACTTTTACAGTAAGAATCCTTTCAATGACACGATTTTAGCTCGTGATGTTCGTCTAACCTTGTTGGAAAAGAAGAAGC
CACAGTTTGACCGAAATAAAAATTTGATTGTCATTGGGGGTTCTGGTGCAGGTAAAACCTTTCGTTTTGTTAAACCCAAC
CTTATCCAACTTAACTGTTCCAATATTGTCGTAGATCCTAAAGACCATTTGGCTGAAAAGACAGGTAAACTCTTTTTAGA
AAACAGTTATCAGGTCAAGGTTTTAGATCTAGTTAATATGACCAATTCAGACGGTTTTAATCCTTTTCGTTATGTAGAAA
CAGAGAATGATTTGAACCGCATGTTAACGGTCTATTTTAACAATACCAAGGGAAATGGTTCTCGCAGTGATCCCTTTTGG
GACGAGGCTTCCATGACATTGGTGAGAGCTATTGCCTCTTATTTGGTGGATTTTTACAATCCTCCAGGAAGTTCCAAGCA
AGAGCAGGAAGCAAGACGTAAGCGCGGCCGTTATCCAGCCTTTTCAGAGATTGGGAAACTCATCAAACTCTTATCAAAGG
GAGACAATCAGGACAAAAGTGTTCTTGAAGTCTTGTTTGAAGATTATGCTAAAAAATACGGTCACGAAAACTTTACTATG
CGAAATTGGGCGGATTTCCAAAACTATAAAGATAAGACCTTGGATTCGGTGATTGCGGTCACAACAGCTAAATTTGCCCT
TTTTAATATCCAATCAGTGATTGATTTGACGCAAAGAGACACTATGGATTTGAAAACGTGGGGCACTCAAAAGACCATGG
TCTATCTTGTTATTCCAGACAATGATACGACCTTTCGTTTCCTATCTGCTTTATTTTTCTCTACGGTTTTCTCCACTTTG
ACCAGACAGGCTGATGTTGACTTTAAAGGGCAACTGCCGATTCATGTTAGAAGCTATCTGGATGAGTTTGCGAATGTCGG
AGAAATCCCAGACTTTGCCGAACAAACCTCAACAGCTCGCTCTAGGAATATGAGTCTAGTTCCAATCTTGCAAAATATTG
CCCAACTCCAAGGACTTTATAAGGAAAAAGAAGCTTGGAAAACCATTTTGGGGAACTGTGACAGTCTCCTCTATTTGGGT
GGGAATGATGAGGAAACCTTTAAGTTCATGAGTGGACTTCTAGGCAAACAAACTATCGATGTCAGAAGTACCAGTCGTTC
ATTTGGTCAGACTGGCTCAAGTTCTACCTCTCACCAGAAAATTGCCCGTGACTTGATGACAGCAGATGAAGTAGGAAATA
TGAAACGAGATGAATGTCTCGTACGCATTGCAGGAGTTCCTGTTTTTCGGACCAAGAAATATTTCCCACTCAAACACAAA
TATTGGAAGTTGCTCGCTGATAAGGAAACCGATGACCGTTGGTGGAACTATCACATCAATCCCTTGGCTAAAGAGGAAGA
ATTGGACTTGTCAGACTATCAAATAAGGGATTTAAGCACTGAAACATCACTACATTAA

Protein sequence :
MYSRQKAFVFGLLGLAFGYFCHRLTLLYDSLTNAPPMDRLAYILGEGLNQVFNPLWLFTFTQKSLLAFILGILTMMLVYL
YVSTGQKVYREGEEYGSARFGTSKEKRYFYSKNPFNDTILARDVRLTLLEKKKPQFDRNKNLIVIGGSGAGKTFRFVKPN
LIQLNCSNIVVDPKDHLAEKTGKLFLENSYQVKVLDLVNMTNSDGFNPFRYVETENDLNRMLTVYFNNTKGNGSRSDPFW
DEASMTLVRAIASYLVDFYNPPGSSKQEQEARRKRGRYPAFSEIGKLIKLLSKGDNQDKSVLEVLFEDYAKKYGHENFTM
RNWADFQNYKDKTLDSVIAVTTAKFALFNIQSVIDLTQRDTMDLKTWGTQKTMVYLVIPDNDTTFRFLSALFFSTVFSTL
TRQADVDFKGQLPIHVRSYLDEFANVGEIPDFAEQTSTARSRNMSLVPILQNIAQLQGLYKEKEAWKTILGNCDSLLYLG
GNDEETFKFMSGLLGKQTIDVRSTSRSFGQTGSSSTSHQKIARDLMTADEVGNMKRDECLVRIAGVPVFRTKKYFPLKHK
YWKLLADKETDDRWWNYHINPLAKEEELDLSDYQIRDLSTETSLH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0973 YP_001198339.1 Type IV secretory pathway, VirD4 component Virulence 89K Protein 0.0 97
SSU98_0987 YP_001200545.1 Type IV secretory pathway, VirD4 component Virulence 89K Protein 0.0 97
traG YP_006309931.1 TraG/TraD family protein Not tested FWisland_1 Protein 0.0 76