Gene Information

Name : NJAUSS_0484 (NJAUSS_0484)
Accession : YP_007570439.1
Strain : Streptococcus suis SC070731
Genome accession: NC_020526
Putative virulence/resistance : Resistance
Product : peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 501064 - 501759 bp
Length : 696 bp
Strand : +
Note : -

DNA sequence :
ATGAAGAACCAGCTTATTAGACTAACAAGTATCAATAAATCCTACAAAAATGGTGATCAAGAACTCCGAGTTTTAAAGAA
TATTGATTTAGAGGTGGAAGAGGGAGAATTTCTTGCCATTATGGGGCCCTCTGGTTCAGGGAAATCAACCTTGATGAACA
TTATTGGGCTTTTGGATCGTTTCAGTTCAGGAAACTATTGGCTGGAAGGTGAAGAAGTCAGTCAACTTTCTGAGAAAAAA
TTAGCTCAGGTTCGGAATGACCAAATCGGTTTCGTCTTTCAACAATTTTTCCTCTTATCGAAACTTAACGCCCTTCAAAA
TGTAGAATTACCCTTGATTTATGCTGGAGTTCCATCAAGCAAACGTAAGGAACTAGCAAAACAGTATCTTGAAAAAGTTG
AGTTGGCAGAGCGGATGACGCATTTACCATCAGAATTGTCTGGTGGTCAAAAACAACGGGTAGCTATTGCTCGTGCACTA
GTCAATACCCCAGCTATTATTTTAGCGGATGAACCTACAGGGGCTCTAGATACCAAGACAGGTGAGCAGATTATGCAACT
TCTGACGGAGTTGAATAATGAAGGAAAGACCATTATCATGGTTACGCATGAGCCTGAGATTGCTGCCTACGCAAAACGAA
AAATCGTTCTACGTGATGGAGTGATCACTGAAGATAGTCGAAGGGAGGGAGTTTAG

Protein sequence :
MKNQLIRLTSINKSYKNGDQELRVLKNIDLEVEEGEFLAIMGPSGSGKSTLMNIIGLLDRFSSGNYWLEGEEVSQLSEKK
LAQVRNDQIGFVFQQFFLLSKLNALQNVELPLIYAGVPSSKRKELAKQYLEKVELAERMTHLPSELSGGQKQRVAIARAL
VNTPAIILADEPTGALDTKTGEQIMQLLTELNNEGKTIIMVTHEPEIAAYAKRKIVLRDGVITEDSRREGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-39 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-39 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-39 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-37 44
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 5e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NJAUSS_0484 YP_007570439.1 peptide ABC transporter ATPase NC_012469.1.7686878. Protein 7e-86 81
NJAUSS_0484 YP_007570439.1 peptide ABC transporter ATPase NC_008702.1.4606598. Protein 9e-50 49
NJAUSS_0484 YP_007570439.1 peptide ABC transporter ATPase CP001581.1.gene798.p Protein 2e-39 44
NJAUSS_0484 YP_007570439.1 peptide ABC transporter ATPase CP001581.1.gene598.p Protein 3e-34 41