|
Name : NJAUSS_0364 (NJAUSS_0364) Accession : YP_007570332.1 Strain : Streptococcus suis SC070731 Genome accession: NC_020526 Putative virulence/resistance : Virulence Product : ATPases with chaperone activity, ATP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 375997 - 378066 bp Length : 2070 bp Strand : + Note : - DNA sequence : ATGGACGACATTTTCAATCAACTCATGGGCAACATGGGTGGCTACAGCACAGAACGTCGCCGTTATTCTATCAATGGGCG TGAAGTGACACCAGAAGAATTTGCTATGTACCGTCAGACTGGTCGCCTGCCACAGACAGAAGAAGTGGCTCAAACACAGG CTAAAGGTCAGATAAAGTCAGACGGAATTCTTGCAAAACTTGGTCGCAATTTGACACAAGATGCGCGTGAAGGTAAGTTG GATCCAGTCATTGGACGAAACAAGGAAATCCAAGAAACCTCTGAAATCCTAGCTCGCCGTACGAAAAATAATCCTGTTTT GGTCGGTGATGCTGGTGTCGGAAAGACAGCGGTAGTAGAAGGATTGGCTCAAGCCATTGTCAATGGTGATGTGCCAGCAG CCATTAAGAACAAGGAAATCATCTCCATCGACATTTCAGGCTTGGAGGCTGGGACTCAGTATCGTGGAGCTTTTGAGGAA AATGTGCAGAATCTTGTGGATGAAGTCAAAAAAGCTGGAAATATCATTCTCTTCTTTGATGAAATTCATCAGATTTTGGG AGCTGGTAGCACTGGCGGAGACTCAGGTTCCAAGGGTTTAGCGGATATTCTCAAACCAGCTTTATCCCGTGGGGAATTGA CGGTTATCGGTGCCACTACACAGGACGAATACCGCAATACTATTCACAAGAATGCTGCTCTGGCTCGTCGTTTCAATGAA GTCAAGGTCAATGCTCCGTCCGCAGAGGACACCTACCAGATTTTGAAAGGGATTAAGCCGCTTTATGAAGCCCACCACAA TATTGAATTGCCAGATGAGGTTTTGAGAGCTGCGGTTGATTATTCCGTCCAATATATTCCACAACGTAGCTTGCCTGATA AGGCTATTGACCTAGTCGATGTGACCGCTGCACATTTGGCTGCACAACATCCTGTGACAGATATTCAGACCTTAGAAGCA GAAATGGCTGAGGCAAAACAGTTGCAGTTGGAAGCAGCTGAAAAAGAGGATTATGAAAAAGCCTTGAATGAAAAAGTCCG TATTGATAAGCTACAAAAACAGATTGATAATCATACGGAGCAACAGAAAGTGGTGGCGACTGTTAATGATGTGGCTCAGG CGGTTGAGCGGATGACAGGAATTCCAGTCTCTCAAATGGGAGCTTCTGACATTGAACGACTCAAGGAATTGAAAAATCGT CTGGCAGCAAACGTTATCGGTCAAGACGATGCGGTGGAAGCTGTATCTCGTGCCATTCGTCGGAATCGTGCAGGTTTTGA TGATGGCAACCGTCCAATTGGTTCCTTCCTCTTTGTTGGTCCGACAGGTGTGGGTAAGACAGAGTTGGCAAAACAGTTAG CACTAGACTTGTTTGGTAACAAGGATGCCATTATTCGTTTGGATATGTCTGAATACAGCGATCGGACAGCCGTTTCCAAA TTAATCGGTACCACAGCTGGCTACATTGGCTACGATGACAATTCCCATACTCTTACCGAGCGCGTCCGCCGCAATCCGTA CTCAATCGTTCTTATGGATGAGATTGAAAAAGCTGATCCACAAGTGATTACCCTTCTCTTGCAAGTGCTAGATGATGGGC ATTTGACTGATGGACAGGGCAACCAAGTTAACTTTAAAAATACCATTATTATCGCGACTTCTAATGCAGGTTTTGGTTAT GGAATGGCAGAAGGTGAAGAAAATCAAGACATCATGGACCGCATCGCACCATTCTTCCGCCCAGAGTTTCTCAATCGTTT TAACGCAGTCATCGAGTTCAAGCATTTGGATAAAGATGATCTCAAAGCCATTGTAGAATTACTCTTGGCCCAGGTCAATA ATACCCTGGCGAAGAAAGGCATCCAATTAACGGTAACGGAAGCTGCCAAAGAATTCTTGATGGAAGAAGGCTATGACAAG GCCATGGGAGCCCGTCCTCTGCGCCGTGTGATTGAAAATCAGATTCGTGATAAGGTGACGGATTTCTATTTGGATCATGT TGATGTCAAATATCTGGAAGCGGATGTGGTTGATGGAAGCATCCAAATAAAAGAGCAAAGCTTTGCTTAA Protein sequence : MDDIFNQLMGNMGGYSTERRRYSINGREVTPEEFAMYRQTGRLPQTEEVAQTQAKGQIKSDGILAKLGRNLTQDAREGKL DPVIGRNKEIQETSEILARRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDISGLEAGTQYRGAFEE NVQNLVDEVKKAGNIILFFDEIHQILGAGSTGGDSGSKGLADILKPALSRGELTVIGATTQDEYRNTIHKNAALARRFNE VKVNAPSAEDTYQILKGIKPLYEAHHNIELPDEVLRAAVDYSVQYIPQRSLPDKAIDLVDVTAAHLAAQHPVTDIQTLEA EMAEAKQLQLEAAEKEDYEKALNEKVRIDKLQKQIDNHTEQQKVVATVNDVAQAVERMTGIPVSQMGASDIERLKELKNR LAANVIGQDDAVEAVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLALDLFGNKDAIIRLDMSEYSDRTAVSK LIGTTAGYIGYDDNSHTLTERVRRNPYSIVLMDEIEKADPQVITLLLQVLDDGHLTDGQGNQVNFKNTIIIATSNAGFGY GMAEGEENQDIMDRIAPFFRPEFLNRFNAVIEFKHLDKDDLKAIVELLLAQVNNTLAKKGIQLTVTEAAKEFLMEEGYDK AMGARPLRRVIENQIRDKVTDFYLDHVDVKYLEADVVDGSIQIKEQSFA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-132 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| NJAUSS_0364 | YP_007570332.1 | ATPases with chaperone activity, ATP-binding protein | VFG0080 | Protein | 1e-147 | 48 |
| NJAUSS_0364 | YP_007570332.1 | ATPases with chaperone activity, ATP-binding protein | VFG0079 | Protein | 4e-138 | 45 |
