Gene Information

Name : NJAUSS_0296 (NJAUSS_0296)
Accession : YP_007570271.1
Strain : Streptococcus suis SC070731
Genome accession: NC_020526
Putative virulence/resistance : Resistance
Product : cation transport ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 303227 - 305095 bp
Length : 1869 bp
Strand : -
Note : -

DNA sequence :
ATGACACTCGTAACCAACCTCAAACAACACAGCCACATCATCACGACCGCTCTTTGCTTGGCGCTCATTCTAATAGGTAT
CCTTCTGTTTCAGACTGGACAGGGATGGGCTCCTATCCTCTTCATTTCAGCCTTTGTCATCGGGGGCTACCAATCAGCCA
AGGAAGGCATTTCTGAGCTGATTTTCGACAAGCACCTGTCTGTCGACCTGCTCATGATTTTAGCTGCTATCGGCTCTGGT
CTAATTGGCTACTGGATGGAGGGGGCTCTACTCATCTTCATCTTCTCCCTTTCTTCTACTCTGGAAGAATTAGCCATGAA
AAAAAGCAAGAATGCGATCGCTGCTTTGATGAACATGACCCCTCCAACAGCTCGCAAAATCGAGGAAAATGGTGACATTA
CTGTCTTAGACACCGCAGCCATCCGCATTGGCGACCTCCTGCAAGTCCGCAAGGGTGACACGGTTCCACTGGATGCTACC
CTCATCAGTCCGCAATCCATCTTTGACGAATCCATGATTACAGGCGAGCCGCTCCCTGCGGAGAAAATGGCTGGCGATGC
TGTTATCGGCGGAACCATTAACCAAGGTCCAACTGTGACCGTACAAGTTACGGCTGAAAAAGGCGATGCCCTCTTCGATA
AAATCGTCCAGATGGTTGAAAACGCCCAAGAATCCAAATCAAAAACAGCGACTTTCATTGAAAATATGGAAGATACCTAT
GTCAAGGTTGTCTTGGTGGTGGTACCACTCTTCATCCTCCTTGCTCATTTTGCACTGGGCTGGGACTGGTTAACTGCCTT
CTACCGAGGCATGATTCTCTTAACCATCGCTTCTCCTTGTGCCCTCGTAGCTTCTTCTTCACCCGCAACACTTTCTGCCA
TCAGCCGTGCGGCACGTAAGGGCATGATTATCAAGGGCGGTGACATTGCGGACAACATCGCCAATCTAGAGGCCATCGTC
TTTGATAAGACGGGTACCCTGACCATTGGTAAACCTGAAGTTGTAGGTGCGACCTATCTTGGCGATGAAGAGCTTATCAA
GCAGGTTGTTCAGGCAGTTGAAAAACAATCAAGCCACCCAATCGCTCAGGCTCTCATGACCTATACGGCTGACAGCTCTG
CTATTGCCCTTCAAAGCCTAGAAGACGTGACAGGAAAAGGCTTGGTGGCAGGCTATGAGGGCGACAGCTGGAAAATCGGT
AAGGCGGGATTTGTGGCGGACAGCCTGGTGAGTCCCCTGTCTGCTGGCTTGCTGGCACAGATCGATGAGGCGGAAAGCAC
TGGGAAAACCCTGGTCTATGTCAGCCAAAATGATGTGCTGGTGGCGATCTTCATGGTGGAAGATAGTTTGAAACCTGAGA
GCAAGCAGCTGATTGCCCAGTTGAAAGAAATGGGCGTGACGCCAATTCTCTTGACGGGTGACCAAGAAAAGACGGCTCGT
TACGTGGCGAGTCAGGTCGGTATTGACCGTGTGATTGCCAACTGTCTGCCGACGGATAAGGCTGCTGTTATCCAAGAATT
ACAAACCGAGTTTGCGTCTGTCGGCATGGTCGGAGACGGCATCAACGACGCTCCCGCCCTGGCTCAAGCCAATGTCAGCT
ATGCTATGGGAAGCGGAACGGACATCGCTATGGAGTCAGCTGACATCGTACTCATGGAAGACCTGACGAGAATTCCTTAC
TCCATTCGTCTCTCTAAGAAAATGCGGGGCATCATCAAGCAGAACATCATCTTTGCGCTATCTGTCATTGCCCTTCTTAT
CATCTCCAACCTCTTCCAGTCTATCAACCTCCCACTCGGTGTGGTGGGCCACGAAGGATCAACGATTTTGGTGATTTTGA
ATGGGTTGAGACTATTGTATTTTAAATAG

Protein sequence :
MTLVTNLKQHSHIITTALCLALILIGILLFQTGQGWAPILFISAFVIGGYQSAKEGISELIFDKHLSVDLLMILAAIGSG
LIGYWMEGALLIFIFSLSSTLEELAMKKSKNAIAALMNMTPPTARKIEENGDITVLDTAAIRIGDLLQVRKGDTVPLDAT
LISPQSIFDESMITGEPLPAEKMAGDAVIGGTINQGPTVTVQVTAEKGDALFDKIVQMVENAQESKSKTATFIENMEDTY
VKVVLVVVPLFILLAHFALGWDWLTAFYRGMILLTIASPCALVASSSPATLSAISRAARKGMIIKGGDIADNIANLEAIV
FDKTGTLTIGKPEVVGATYLGDEELIKQVVQAVEKQSSHPIAQALMTYTADSSAIALQSLEDVTGKGLVAGYEGDSWKIG
KAGFVADSLVSPLSAGLLAQIDEAESTGKTLVYVSQNDVLVAIFMVEDSLKPESKQLIAQLKEMGVTPILLTGDQEKTAR
YVASQVGIDRVIANCLPTDKAAVIQELQTEFASVGMVGDGINDAPALAQANVSYAMGSGTDIAMESADIVLMEDLTRIPY
SIRLSKKMRGIIKQNIIFALSVIALLIISNLFQSINLPLGVVGHEGSTILVILNGLRLLYFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA YP_005732869.1 cadmium-translocating P-type ATPase Not tested Type-V SCCmec Protein 2e-90 42
SE0062 NP_763617.1 copper-transporting ATPase copA Not tested SCCpbp4 Protein 2e-90 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NJAUSS_0296 YP_007570271.1 cation transport ATPase BAC0092 Protein 1e-99 42