Gene Information

Name : YM304_09530 (YM304_09530)
Accession : YP_007563205.1
Strain : Ilumatobacter coccineum YM16-304
Genome accession: NC_020520
Putative virulence/resistance : Virulence
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1058482 - 1059183 bp
Length : 702 bp
Strand : +
Note : -

DNA sequence : 
ATGCTCCAGTACCTCGACGTCGTCAAGAGCTACGGCTCCGGATCGACCGAAGTGCGTGCGGTCACCGACGTCTCCCTCAC
GGTCCAACGCGGCGAATTCGTCGCCGTCATGGGGCCATCGGGGTGCGGCAAGTCGACCCTGCTGCACCTGGCCGGAGCGC
TCGAACAACCGAGCGCCGGCCGAGTCATCGTCGACGGCAACGACCTCGCCGACCTGTCACCCGCCCAGCAGGCAGAGCTC
CGACGCAATGATGTCGGCTACGTCTTCCAATCGCTCAACCTGATTCCGGCGCTCACCGCACTCGAGAACGTGATGCTGCC
GCTCGAACTCGACGGAACGCCCTCGAAACAGGCCCGCAAGATCGCCCGCGCCGCGCTCGAACAGGTCGGCCTCGACCAAC
ACCTCGATCGCTATCCCGACGACTTCTCCGGCGGTCAACGCCAACGCATCGCCATCGCCCGAGCGCTCATCGGCGACCGC
CGCCTGCTGCTGGCCGACGAGCCGACCGGCGCACTCGACACCGTCAACGGCGACCAGGTCGTCGAACTGCTCGCGGGTCT
CGCTCGCGACCGCGGCGTGTCGGTGGTGATGGTCACCCACGACCCGCGATTCGCCTCGTGGGCCGACCGCGTGATCTTCC
TGCGTGACGGTCGCGTGGTCGACGAGTCCGCTCCCGCGTTCGACGACAGCTCGATCCGATGA

Protein sequence : 
MLQYLDVVKSYGSGSTEVRAVTDVSLTVQRGEFVAVMGPSGCGKSTLLHLAGALEQPSAGRVIVDGNDLADLSPAQQAEL
RRNDVGYVFQSLNLIPALTALENVMLPLELDGTPSKQARKIARAALEQVGLDQHLDRYPDDFSGGQRQRIAIARALIGDR
RLLLADEPTGALDTVNGDQVVELLAGLARDRGVSVVMVTHDPRFASWADRVIFLRDGRVVDESAPAFDDSSIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-35 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YM304_09530 YP_007563205.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-40 49
YM304_09530 YP_007563205.1 putative ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 9e-46 44
YM304_09530 YP_007563205.1 putative ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-39 43
YM304_09530 YP_007563205.1 putative ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-42 42
YM304_09530 YP_007563205.1 putative ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 7e-38 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YM304_09530 YP_007563205.1 putative ABC transporter ATP-binding protein VFG2059 Protein 2e-21 42