Gene Information

Name : YM304_42560 (YM304_42560)
Accession : YP_007566508.1
Strain : Ilumatobacter coccineum YM16-304
Genome accession: NC_020520
Putative virulence/resistance : Virulence
Product : putative Xre family DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4798658 - 4798894 bp
Length : 237 bp
Strand : -
Note : -

DNA sequence :
ATGGAGAACCGACTGAAAGAGCTCCGAGCCGTCAGCGGCTGGAGCCAGGCCCACCTCGCCGACCGACTCGGCGTCAGCCG
CCAGACCGTCAACGCACTGGAGAAGGGCCGCTACGACCCCAGCCTCCCGCTGGCGTTCCGCCTCGCCCGAGTCTTCTCGA
CCACCATCGAAGAACTGTTCACCCCTGATGACGACGACCTCGGTCAAACCGACGGCTCCGTCACCTCACGAGTCTGA

Protein sequence :
MENRLKELRAVSGWSQAHLADRLGVSRQTVNALEKGRYDPSLPLAFRLARVFSTTIEELFTPDDDDLGQTDGSVTSRV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 2e-11 53
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 6e-06 47
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 4e-06 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YM304_42560 YP_007566508.1 putative Xre family DNA-binding protein VFG2175 Protein 2e-06 47
YM304_42560 YP_007566508.1 putative Xre family DNA-binding protein VFG2168 Protein 2e-06 47