Gene Information

Name : YM304_41370 (YM304_41370)
Accession : YP_007566389.1
Strain : Ilumatobacter coccineum YM16-304
Genome accession: NC_020520
Putative virulence/resistance : Virulence
Product : iron siderophore ABC transporter iron siderophore-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4684110 - 4685210 bp
Length : 1101 bp
Strand : -
Note : -

DNA sequence :
GTGAACAGAACGAAACGAATCGCCACCCTCGCCGTTGCCTCCTGCCTGGTCATCGCCAGTTGCGGAAGCGACGACCCGGC
CGACACCGAGGCCACCAGCACCACGGAAGCCGAGCCGGTCGCAACCGAGGCGCCCGTTGTGACCGAGGCACCCGTCGCAA
CCGAGGCGCCGGTCACGACCGACGCGCCGGTCGCAACCGACGCGCCGGTCGCAACCGACGCGCCGGTCGAGACGGTGCCG
GCGGTGTTCCCGCGCACCGTCGAGCACGCTCTCGGCAGTACCGAGATCGCGGCGGAGCCGATGCGCGTCGTGTCGCTCGA
CCGGTCGCTCACCGACCCGGTGCTCGCCCTCGGGCTCGACCTCGTCGGCTACACCACCTATCAGGACCCCGACGGTGACC
TGCCCGCCTACTTCGGCGACGCGCTCGCCGACCACGCCGCCGAGGCTGAATGGGTTGGCGACCTGCTCTCGCCGAACCTC
GAAGCCATCCTCGCGCTGCAACCCGACCTGATCGTCTCGTCGATGGTGCGCCACGAGGCGATCTACGCCGAACTCAGCCA
GATCGCGCCCACCGTCATGTCGGAGTCGGGCGGCGGCGGCTGGAAGGACAACATGCGTCTCGTCGCCGAAGCGACCGGCC
GCGAAGACGTCGCCGAACAGGTGCTCGGCGACTACGAAGCGCGCGCCGCCGAGATCGGTGCAGCCATCAACGAGGTCGCC
GATTCTCCGACGATCTCCGTCGTCCGGTTCCTCGGCGAGATCCGGCTGTACCAGCCGGTGAGCTTCAGCGGCACCGTCCT
CGAAGACGCCGGCCTCGCCCGGCCCGAGAGCCAGCAGGACCGCGAGGACTTCATCCTCCAGATCAGCGAAGAGGAACTCC
AGCTCGCCGACGCCGATCACCTCTTCTTCACCGTGTACGACCGCGAAGACGCCGAGGAAGCGTTCGCCGAACTCGAAGCG
CGGCCGCTGTGGCAGACGCTCGGCGCAGTGCAGAACGGCAACGCGCACCCGGTGGTCGACGACCTCTGGATGAGCGGCGT
CGGTGTGTTCGGCGCCCACGCGATCCTCGACGACCTCGCGGTCACGTTCGGGGTCGGCTGA

Protein sequence :
MNRTKRIATLAVASCLVIASCGSDDPADTEATSTTEAEPVATEAPVVTEAPVATEAPVTTDAPVATDAPVATDAPVETVP
AVFPRTVEHALGSTEIAAEPMRVVSLDRSLTDPVLALGLDLVGYTTYQDPDGDLPAYFGDALADHAAEAEWVGDLLSPNL
EAILALQPDLIVSSMVRHEAIYAELSQIAPTVMSESGGGGWKDNMRLVAEATGREDVAEQVLGDYEARAAEIGAAINEVA
DSPTISVVRFLGEIRLYQPVSFSGTVLEDAGLARPESQQDREDFILQISEEELQLADADHLFFTVYDREDAEEAFAELEA
RPLWQTLGAVQNGNAHPVVDDLWMSGVGVFGAHAILDDLAVTFGVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagD YP_003782433.1 iron-siderophore binding protein Virulence PiCp 1 Protein 2e-43 42
fagD YP_005684491.1 Iron siderophore binding protein Virulence PiCp 1 Protein 4e-43 42
fagD YP_005680310.1 Iron siderophore binding protein Not tested PiCp 1 Protein 4e-43 42
fagD YP_005682400.1 Iron siderophore binding protein Virulence PiCp 1 Protein 4e-43 42