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Name : clpC (YM304_36940) Accession : YP_007565946.1 Strain : Ilumatobacter coccineum YM16-304 Genome accession: NC_020520 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpC Function : - COG functional category : - COG ID : - EC number : - Position : 4187504 - 4190122 bp Length : 2619 bp Strand : + Note : - DNA sequence : ATGTTCGAACGCTTTACCGACAGGGCCCGCAGGGTCGTGGTGCTCGCGCAGGAGGAAGCGCGCCTGCTGAACCACAGCTA CATCGGGACCGAGCACATCCTCCTCGGGTTGATCCACGAAGGTGAAGGTGTCGCAGCGAAGGCGCTCGAGTCGCTCGGCA TCTCACTCGAAGCCGTGCGCAGCCAGGTCGAGGAGATCATCGGTCAGGGCGGCTCGTCGCCGTCGGGCCACATTCCCTTC ACGCCGCGTGCCAAGAAGGTCCTCGAGTTGTCGCTGCGTGAAGCACTGCAGCTCGGCCACAACTACATCGGCACCGAGCA CATCCTCCTCGGCCTCATCCGTGAGGGTGAAGGCGTCGCCGCACAGGTCCTCGTCAAGCTCGGCGCCGACCTGTCGCGAG TGCGCCAGCAGGTCATCCAGTTGCTCTCGGGCTACCAGGGACCAGCCGGAAGCTCCGGTTCGGGTTCGAGTTCCGGGTCG GGCAGCCGCGAGGGCGCCGCTGCCGGGGTGGGCCCCGGTTCGAAGGAAGGCGACGAGAAGGGTGGCAACTCCCAGATCCT CGACCAGTTCGGCCGCAACCTCACCGAAGCCGCTCGCGAAGGTCAGCTCGATCCGGTCATCGGCCGCAGCAAAGAACTCG AGCGGGTCATGCAGATCCTCTCGCGTCGCACCAAGAACAACCCGGTGCTCATCGGTGAGCCCGGCGTCGGCAAGACCGCC ATCGTCGAAGGCCTCGCCCAGAAGATCGTCAACAACGACGTTCCCGACACGCTCACCGGCAAGCAGCTGTACACGCTCGA CCTCGGCGCACTCGTCGCCGGCTCGCGTTACCGCGGTGACTTCGAAGAGCGACTGAAGAAGGTCCTCAAAGAGATCAAGT CGCGCGGCGACATCCTCCTGTTCATCGACGAGATCCACACCCTCGTGGGTGCCGGTGCCGCCGAAGGCGCGATCGACGCC GCGTCGATCCTGAAGCCGATGCTCGCCCGCGGTGAGCTCCAGACGATCGGTGCGACCACCACCGAGGAGTACCGCAAGCA CGTCGAGAAGGACGCCGCACTCGAGCGTCGTTTCCAGCCGGTCAAGGTCGACGAGCCCACGCTGGCCCACACGATCGAGA TCCTCAAGGGCATCCGCGATCAGTACGAGAGCCACCACCGGGTCACCATCACCGACCAGGCGCTCGTCGCCGCGGCGAAC CTCGCCGATCGGTACATCTCCGATCGTCACCTTCCCGACAAGGCGATCGATCTGATCGACGAAGCTGGCTCACGTCTGCG CATCAAGCGCATGGCCACGCCGCCCGACCTGCGCGAGATCGAGACCAAGCTCCTCGAGGTCCAAGAGGCCAAGAAGACCG CCGTCGAAGATCAGCAGTTCGAAGAGGCCGGCCGCCTCCGTGACGAGGAGAAGAAGCTCCTCGAGGAGAAGGCCGAGAAG GAAGCCGAAGTCAAGGCCGACGGCGTCGACCTGTTCGACGAGGTCGACGAAGAGGCCGTGGCCGAGGTGCTGTCGCTCTG GACCGGCATTCCGGTCTACAAGCTCACCGAAGAAGAGACCGAGCGTCTCCTCCACATGGAAGACGAGCTGCACAAGCGGA TCATCGGCCAGGAGAACGCCATCAAGGCGGTCAGCCAGTCGATCCGTCGTACTCGTGCGGGCCTCAAGGACCCGAAGCGT CCGTCGGGTTCGTTCATCTTCCTCGGCCCGACCGGCGTCGGCAAGACCGAGCTGGCCAAGACGCTCACCGAGTTCTTGTT CGGTGACGACCAGTCGATGATCACGCTCGACATGTCGGAGTACATGGAACCGCACGCGGTGAGTCGCCTCGTCGGTTCGC CTCCCGGCTACGTCGGCTACGAAGACGGTGGCCAGCTCACCGAGGCCGTGCGACGCAAGCCGTTCTCCGTCGTGCTCTTC GACGAGATCGAGAAGGCGCACCCCGACGTGTTCAACACGCTCCTCCAGATTCTGGAAGAGGGTCGCCTGACCGACTCGCA GGGTCGTTCGGTCGACTTCCGCAACACGGTGCTGATCATGACCTCGAACCTGGGTACGCAGGATCTGCGCAAGGCCAACG TCGGCTTCAACACCGGCGACACCGCCATGAGCTACGAGCGCATGAAGGAGAAGGTCAACGAGTCGCTGAAGTCGCACTTC CGTCCGGAGTTCCTCAACCGCATCGACGAGACCATCGTGTTCCACGAGCTCGCTCACCACGAGGTGTTGCAGATGGTCGA CATGCAGATGGAGCGTCTGGTCAAGCAGCTCGAAGGCCAGGGCCTCGGTATCGAACTGAAGCAGGAAGCCAAGGAACTGC TCGCCGATCGCGGGTACGACCCGACGCTCGGCGGACGTCCGCTGCGCCGTGCGATCCAGCGTCACATCGAAGATGCGCTG TCGGAGAAGATCCTGTACAAGGACTTCTCGGCCGGTGAGATCATCGTGGTCGACGTCGAGGACGATCCCGAACGCGAGGG CGAGAAGCGCTTCACGTTCGAGGCGGTCGAGGGCTTCGTGCCGCCGGCCTCGGTCGAACTCGAACTGACGGCGACGGAGA AGCCGGCCCCGCCGGTCGAGGGTGGCGAACTCCCGCCGCCTCCTCCCGAGTCCGAGTGA Protein sequence : MFERFTDRARRVVVLAQEEARLLNHSYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRSQVEEIIGQGGSSPSGHIPF TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLSRVRQQVIQLLSGYQGPAGSSGSGSSSGS GSREGAAAGVGPGSKEGDEKGGNSQILDQFGRNLTEAAREGQLDPVIGRSKELERVMQILSRRTKNNPVLIGEPGVGKTA IVEGLAQKIVNNDVPDTLTGKQLYTLDLGALVAGSRYRGDFEERLKKVLKEIKSRGDILLFIDEIHTLVGAGAAEGAIDA ASILKPMLARGELQTIGATTTEEYRKHVEKDAALERRFQPVKVDEPTLAHTIEILKGIRDQYESHHRVTITDQALVAAAN LADRYISDRHLPDKAIDLIDEAGSRLRIKRMATPPDLREIETKLLEVQEAKKTAVEDQQFEEAGRLRDEEKKLLEEKAEK EAEVKADGVDLFDEVDEEAVAEVLSLWTGIPVYKLTEEETERLLHMEDELHKRIIGQENAIKAVSQSIRRTRAGLKDPKR PSGSFIFLGPTGVGKTELAKTLTEFLFGDDQSMITLDMSEYMEPHAVSRLVGSPPGYVGYEDGGQLTEAVRRKPFSVVLF DEIEKAHPDVFNTLLQILEEGRLTDSQGRSVDFRNTVLIMTSNLGTQDLRKANVGFNTGDTAMSYERMKEKVNESLKSHF RPEFLNRIDETIVFHELAHHEVLQMVDMQMERLVKQLEGQGLGIELKQEAKELLADRGYDPTLGGRPLRRAIQRHIEDAL SEKILYKDFSAGEIIVVDVEDDPEREGEKRFTFEAVEGFVPPASVELELTATEKPAPPVEGGELPPPPPESE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 70 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_007565946.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0079 | Protein | 0.0 | 59 |
| clpC | YP_007565946.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0080 | Protein | 9e-150 | 51 |
