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Name : lysS (YM304_28830) Accession : YP_007565135.1 Strain : Ilumatobacter coccineum YM16-304 Genome accession: NC_020520 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 3204802 - 3206355 bp Length : 1554 bp Strand : + Note : protein synonym:lysine--tRNA ligase DNA sequence : GTGAGCGACTCCTCCACACCCAGCAACCCGGCTGCCGACGCAGCGCCCGGCGACACCGCCGACGACGTGCTGTCCGGCAG CGGCCTGGAAGCGGAGAAGGCGCGTCGTCTGGCGCTCGTCGACGAGATGCGCAACGCAGGCGCCAACCCCTATCCGTACC GCTTCGACCGGACGCACACGCTCGGCGAGGTCCGGTCGAGCTGGGGCGAACTCGAACCCGGCGTCGAGACCGACGATGCG GTGAGCGTGGCCGGTCGCATCATGCTCAAGCGCGATTCCGGAAAACTCGTCTTCGCCACGATCCGTGACCGTTCGGGCGA CATCCAACTCTTCATCTCCAAGGCGGTTGTCGGCGACGATGCGTTCGCTGCCGTGAAAGCCCTCGACCTCGGCGACTGGG TCGGCGTCGACGGCACGGTCATGACCACTCGCAAGGGCGAACTGTCGGTCAAGCCCGATCGCGTCGAACTGCTGTCGAAG GCCATCCGGCCGCTTCCCGACAAATGGCACGGCCTGTCCGACGTCGACACCCGGTTCCGTCAGCGCTACGCCGACCTGAT CGTCAACGACGCGGCACGACGCAACTTCGAGATCCGCCACGAGACGGTGGCCAGCTTCCGTCGCACGCTCGCCGCGCACG GGTTCATCGAAGTCGAGACACCGGTGCTGCACCCGGAGGTCGGCGGCGCTCACGCACGCCCCTTCACGACGCACCACAAC TCCCTCGACATGCAGCTCTACCTGCGCATCGCGGTCGAGCTGTATCTGAAGCGCCTGATCGTCGGCGGCATGGAGCGCGT CTACGAGATCGCACGCACGTTCCGCAACGAGGGCACGTCGACGCGGCACAACCCCGAGTTCACGATGATGGAGCTCTACC AGGCGTTCGGCGACTGGAACGACGTGATGGACATCACCGAAGAGCTCATCACCACCGCCGCCCGTGACGCTCTCGGCACC ACCGTCGTCGAGATCCGCGGCGAATCGATCGACCTCGCCGACCCGTGGCCGCGCAAGCGCATGATCGACTACGCGTCGGA GGGCACCGGCGTCGAACTGCATCCGTCGATGCCGGTCGCCGACGTCCGCAAGGTCGCCGCCGACCACGACGTGTTCGTCG AGGAACGTTGGGGTTCGGGCAAGATCATCGAGGAGATCTTCGAGAAGACCTCCGAGTCCGCCATCGTGCGGCCGACGTTC GTCACCGGCCACCCCGTCGAGATCTCACCGCTCGCACGGCAGGACCGCAACGACCCGTTCCTCACCGAGCGCTTCGAACT GTTCGTCGACGGACGAGAACTCGCCAACGGCTACTCCGAGCTCAACGACCCAGTCGAACAGCGGGCACGTTTCGAAGACG AACAAGCGGCGAAGGAAGCCGGCGATGCCGAAGCCGGCACCGTCGACGAGGACTACATCCGGGCGCTCGAGTACGGCATG CCGCCGACCGGCGGCCTCGGCATCGGCATCGATCGTCTGGCGATGCTGCTCGCCGGCGTCGATTCGATCAAGGAAGTCAT CCTCTTCCCGACGCTGCGCCCAGAAGCCCCCTGA Protein sequence : MSDSSTPSNPAADAAPGDTADDVLSGSGLEAEKARRLALVDEMRNAGANPYPYRFDRTHTLGEVRSSWGELEPGVETDDA VSVAGRIMLKRDSGKLVFATIRDRSGDIQLFISKAVVGDDAFAAVKALDLGDWVGVDGTVMTTRKGELSVKPDRVELLSK AIRPLPDKWHGLSDVDTRFRQRYADLIVNDAARRNFEIRHETVASFRRTLAAHGFIEVETPVLHPEVGGAHARPFTTHHN SLDMQLYLRIAVELYLKRLIVGGMERVYEIARTFRNEGTSTRHNPEFTMMELYQAFGDWNDVMDITEELITTAARDALGT TVVEIRGESIDLADPWPRKRMIDYASEGTGVELHPSMPVADVRKVAADHDVFVEERWGSGKIIEEIFEKTSESAIVRPTF VTGHPVEISPLARQDRNDPFLTERFELFVDGRELANGYSELNDPVEQRARFEDEQAAKEAGDAEAGTVDEDYIRALEYGM PPTGGLGIGIDRLAMLLAGVDSIKEVILFPTLRPEAP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-113 | 48 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 3e-88 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_007565135.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 6e-114 | 48 |
