Gene Information

Name : pdxS (YM304_19820)
Accession : YP_007564234.1
Strain : Ilumatobacter coccineum YM16-304
Genome accession: NC_020520
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : -
COG ID : -
EC number : 4.-.-.-
Position : 2201109 - 2201996 bp
Length : 888 bp
Strand : +
Note : -

DNA sequence :
ATGAGTGACACGCGCAGCACGGGTACGTTCCCCGTCAAACGGGGATTGGCCGAGATGATGAAGGGCGGCGTCATCATGGA
CGTCGTCACACCCGAGCAGGCAAAGATCGCCGAAGACGCTGGTGCCGTCGCCGTCATGGCGCTCGAGCGAGTGCCCGCCG
ACATCCGCAAGGACGGCGGCGTGGCCCGCATGAGCGACCCCGAGATGATCGACGGCATCCAGTCCGCAGTCTCGATTCCG
GTCATGGCCAAGGCTCGTATCGGCCACTTCGTCGAAGCGCAGATCCTGCAAGCGCTCGGCGTCGACTTCATCGACGAGTC
CGAGGTGCTCACCCCGGCCGACGAGGCGTACCACATCGACAAGATGGCGTTCGACGTGCCGTTCGTGTGCGGCGCCACCA
ACCTCGGCGAGGCGCTGCGACGCATCTCCGAAGGCGCGGCCATGATCCGCTCGAAGGGCGAGGCCGGCACCGGCAACGTC
GTCGAGGCGGTACGTCACCTCCGCTCGATCATCGGCGACATGAAGCGGCTCACGCAGGCCGACGAAGCCGAGCTGTTCGG
TTGGGCCAAAGAACTGCAGGCGCCACTGCCGCTCGTCCAGGAGATCGCCGAGACCGGCACGCTGCCGGTGCCGTTGTTCT
GTGCGGGCGGACTCGCCACGCCGGCCGATGCCGCGCTCGCCATGCAGCTCGGTGCCGACGCCGTGTTCGTCGGGTCGGGC
ATCTTCAAGTCCGACGATCCCGCACCGCGGGCGAAGGCCATCGTCGAGGCGACCACGCACTTCCAAGACGCCGACATCCT
CGCCAAGGTGAGTCGCGGTCTCGGCGCTCCGATGACCGGCATCGCCATGGACGAGATCAACCAGCGCTACGCCGAGCGGG
GCTGGTGA

Protein sequence :
MSDTRSTGTFPVKRGLAEMMKGGVIMDVVTPEQAKIAEDAGAVAVMALERVPADIRKDGGVARMSDPEMIDGIQSAVSIP
VMAKARIGHFVEAQILQALGVDFIDESEVLTPADEAYHIDKMAFDVPFVCGATNLGEALRRISEGAAMIRSKGEAGTGNV
VEAVRHLRSIIGDMKRLTQADEAELFGWAKELQAPLPLVQEIAETGTLPVPLFCAGGLATPADAALAMQLGADAVFVGSG
IFKSDDPAPRAKAIVEATTHFQDADILAKVSRGLGAPMTGIAMDEINQRYAERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 9e-96 72
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 8e-96 72
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-95 72