Gene Information

Name : nrdE (Bbr_1899)
Accession : YP_007555686.1
Strain : Bifidobacterium breve UCC2003
Genome accession: NC_020517
Putative virulence/resistance : Unknown
Product : Ribonucleoside-diphosphate reductase alpha chain
Function : -
COG functional category : -
COG ID : -
EC number : 1.17.4.1
Position : 2386275 - 2388470 bp
Length : 2196 bp
Strand : -
Note : -

DNA sequence :
ATGACCGACCTCACCAACACCGAATTGTCGCTCGACAACACCACCGACACCTCGGCAGAACAGTACGATCCGGCACACGA
CTACCACGCGCTCAACGCGATGCTCAATCTCTATGATGCCGACGGCAAGATCCAGTTCGATAAGGACAAGGCCGCCGAGC
GTGAATACGTGACCGGCCATGTGGCCGCCAATATCAAGAGGTTCGACTCCACCGCCGATCGTCTCGAATACCTGATCAGC
AACCAGTACTACAACCCTGCGGTCTTCAACCAGTACTCCGCTGAATTCCTCGACCGCATCTACGAGCACGTGGAATCCGC
CGGCTTTGAGTTCGGCACTTTCCTTGGTGCGTTCAAGTTCTACACGTCCTACGCGCTCAAGACGTTCGATGGTCGCCTCT
ATCTTGAGGACTTCCCGCAGCGTTGCGCCGCTGTGGCCCTGGAGCTCGCCGCCGGCAACGAGCAGCAGGCCATCGAATAC
GCCGGCGAAATGCTTGCCGGCCGTTTCCAGCCTGCCACCCCGACCTTCCTGAACCTCGGCAAGGCCCAGCGAGGTGAGCC
GGTCAGCTGCTTCCTGGTGCGCATCGAAGACAACATGGAGTCGATTTCGCGCGGCATCAATGCGGCCCTCCAGCTTTCCA
AGCGCGGCGGCGGCGTCGCCCTGCTGCTGAGCAACCTGCGTGAGCTCGGCGCCCCGATTAAGCACATCGAAAACCAGTCC
AGCGGCGTGATTCCGGTGATGAAGCTGTTGGAGGACTCCTTCTCCTACGCCAACCAGTTGGGCGCACGTCAAGGTGCCGG
CGCAGTGTATCTTAACGCCCACCACCCGGATATCCTGCGTTTCCTGGACACCAAGCGAGAGAACGCGGACGAGAAAATCC
GCATCAAGTCGCTGGCACTCGGCGTGGTGATTCCGGACATCACCTTCGAGCTGGCCAAGCAGAAGGCGCAGATGGCGCTG
TTCAGCCCCTACGATGTGGAGCGCGTATATGGCAAGCCGTTCGCCGACATCTCCGTCAGCGAGCACTACGACGAGATGGT
GGCCGACGATCGCATCAAGAAGACCTACATCGACGCCCGCAAGTTCTTCACCACCATCGCCGAGCTGCAGTTCGAGTCCG
GCTACCCATACATCGTGTTTGAGGACACGGTCAACCGCGCCAACCCGATCGAAGGCCGCGTGACCATGTCTAACCTGTGC
TCCGAAATCCTGCAGGTGCAGGAGCCGAGCGCATACAACGAAGACCTCACCTATGCGCACGTGGGCCGCGATATCTCCTG
CAACCTTGGCTCGCTGAACATCGCCAAGGCCATAGACGGCGGCCTGACTCACACTGTGGAAACCGCGATCCGTGCGCTCA
CCTCGGTGGCCGAGCACACGAGTATCGACGCGGTGCCCTCGATCCGCCGCGCCAACGAGGAGGGTCACGCCATCGGCCTC
GGCCAGATGAACCTGCACGGCTTCCTGGCCCGCGAAGGCATTCACTACGGCTCCGAAGAAGGCCTCGACTTCACCGACAT
GTACTTCATGACCGTGGCCTACCATGCCTACCGCGCCTCGCACGCGCTCGCCGTGGAACACGGCCATCCGTTCAAGAGCT
TCGCTACGTCCGACTACGCCAAGCCGGCTGGCCAAGGCAATTACTTTGACAAGTACACCGATGGTCGCCGCTCGCTTGAA
CCGCGTACCGCCAAGGTTCGTGAGCTGTTCGCCAAGTACGGTATCGAGATTCCGACCGTGTCCGATTGGGAGACGTTGCG
CGACTCGATCTTGAAGGACGGCATCTACAACCAGAACCTGCAGGCCGTGCCGCCCACCGGTTCGATCTCCTACATCAACC
ACTCCACGAGCTCGATTCACCCAATTGCCTCGAAGATCGAGATTCGCAAGGAAGGCAAGATCGGGCGCGTCTATTACCCG
GCGGCCTACATGACCAACGACAACCTTGAGTACTACAAGGACGCCTACGAAATCGGCTGGAAGGCCATCGTCGACACGTA
CGCTGAGGCCACTCAGCACGTGGATCAGGGACTGTCGCTGACCTTGTTCTTCCCGGACACCGCCACCACCCGCGACCTCA
ACAAGGCGCAGATCTACGCCTGGCGCAAGGGCATCAAAACCCTCTACTACATCCGTATCCGTCAGCAAGCCCTGGAAGGA
ACCGAAGTCCAAGGCTGCGTCTCCTGCATGCTCTGA

Protein sequence :
MTDLTNTELSLDNTTDTSAEQYDPAHDYHALNAMLNLYDADGKIQFDKDKAAEREYVTGHVAANIKRFDSTADRLEYLIS
NQYYNPAVFNQYSAEFLDRIYEHVESAGFEFGTFLGAFKFYTSYALKTFDGRLYLEDFPQRCAAVALELAAGNEQQAIEY
AGEMLAGRFQPATPTFLNLGKAQRGEPVSCFLVRIEDNMESISRGINAALQLSKRGGGVALLLSNLRELGAPIKHIENQS
SGVIPVMKLLEDSFSYANQLGARQGAGAVYLNAHHPDILRFLDTKRENADEKIRIKSLALGVVIPDITFELAKQKAQMAL
FSPYDVERVYGKPFADISVSEHYDEMVADDRIKKTYIDARKFFTTIAELQFESGYPYIVFEDTVNRANPIEGRVTMSNLC
SEILQVQEPSAYNEDLTYAHVGRDISCNLGSLNIAKAIDGGLTHTVETAIRALTSVAEHTSIDAVPSIRRANEEGHAIGL
GQMNLHGFLAREGIHYGSEEGLDFTDMYFMTVAYHAYRASHALAVEHGHPFKSFATSDYAKPAGQGNYFDKYTDGRRSLE
PRTAKVRELFAKYGIEIPTVSDWETLRDSILKDGIYNQNLQAVPPTGSISYINHSTSSIHPIASKIEIRKEGKIGRVYYP
AAYMTNDNLEYYKDAYEIGWKAIVDTYAEATQHVDQGLSLTLFFPDTATTRDLNKAQIYAWRKGIKTLYYIRIRQQALEG
TEVQGCVSCML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 0.0 69