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Name : clpB (Bbr_1781) Accession : YP_007555572.1 Strain : Bifidobacterium breve UCC2003 Genome accession: NC_020517 Putative virulence/resistance : Virulence Product : ClpB protein Function : - COG functional category : - COG ID : - EC number : - Position : 2206099 - 2208768 bp Length : 2670 bp Strand : - Note : - DNA sequence : ATGGAACAGAAGTTCACCACTATGGCCCAAGAAGCCGTCGGCGACGCGATTCAGAGTGCGTCCGCCGCAGGAAACGCGCA GGTCGAGACCCTGCACGTCATGGATGCGTTGCTGCGTCAGGAAAACGGCGTGGTGCGCTCCCTCATCGAGGCCGCGGGCG GAGACCCACAGGCCATCGGCGCTGCCGTGCGTAACGCTTTGGTCGCGCTGCCGAGTGCGTCCGGCTCCAGCACTTCGCAG CCGCAGGCCAGCCGTCAGCTGACCGCAGCCATCGCCCAGGCCGAGAAGGAAATGCAGCAGATGGGCGACGAATACGTCTC CACCGAGCACCTGCTCATCGGCATCGCGGCCAGCAAGCCGAACCAGTCGGCTGAAATCCTGGAGAAAAACGGCGTCACCG CCGCTTCCCTGCGTAAGGCTGTGCCCGGCGTGCGCGGCGGCGCGAAAGTCACCAGCCCTGACGCGGAAGGCTCGTACAAA GCTTTGGAGAAGTACTCTACCGACCTGACGGCCGCCGCCAAGGAAGGCAAGCTCGACCCGGTCATCGGCCGTGACCAGGA GATTCGCCGTGTGATTCAGATCCTGAGCCGCCGTACCAAGAACAACCCTGTGCTGATCGGTGAGCCTGGCGTCGGCAAGA CCGCCGTCGTGGAGGGCTTGGCCCAGCGTATCGTGGCGGGCGACGTGCCCACCACCCTGCAGGGCAAGAAGCTCATCTCC CTTGACCTGGGCTCCATGGTGGCCGGCTCGAAGTACCGTGGTGAGTTTGAGGAGCGCCTGAAGAGCGTGCTCAACGAAAT CAAGAACGCGGACGGCCAGATCATCACCTTCATCGACGAGATCCATACCATCGTCGGCGCGGGTGCGGCCGAAGGCTCCA TGGATGCCGGCAATATGCTCAAGCCCATGCTGGCCCGCGGCGAGCTGCGGCTGATCGGCGCGACCACGCTGGACGAGTAC CGCGAGAACATCGAGAAGGATCCGGCGCTGGAGCGTCGTTTCCAGCAGGTGTTCGTGGGCGAGCCTTCCGTGGAAGACAC CATCGCCATTCTGCGTGGCCTGAAGCAGCGTTACGAGGCTCACCATAAGGTAACAATCGGCGATGACGCGTTGGTTGCCG CCGCAACCCTGTCGAACCGCTACATTTCGGGTCGTCAGCTGCCGGACAAGGCCATCGATCTGGTTGATGAGGCGGCTGCC CACCTGCGTATGGAGCTCGACTCCTCGCCTGAGGAAATCGATGAGCTGCAGCGCAAGGTGACCCGTCTTGAGATGGAGGA AATGCAGCTCAAGAAGGCCGAGGATCCCGCGTCCAAGGAGCGTCTGGGCAAGCTGCAAGCCGAACTCGCGGACACCCGTG AGAAGCTCAGCGGCCTCAAGGCGCGTTGGGATGCGGAACAGGCCGGCCATAACAAGGTCGGTGACCTGCGTGCCAAGCTC GATGACCTGCGTGTGCAGGCGGATAAGTTCACTCGTGAGGGGAATCTGGCTGAGGCCTCGAAGATTCTGTACGGAGAGAT TCCGGCTATTCAGAAGGAGCTCGCCGCTGCGGAAAGCGCGGATGCCGAATCTGCTGATGCGGGTGCCGAGAATCCGGCTG ATGAGCCGATGGTTCCGGACCGCGTGGATGCCGACTCGGTGGCTGAAATCGTCTCCGACTGGACCGGCATTCCCGTTGGC CGCCTGATGCAGGGCGAAAACGAGAAGCTGCTGCACATGGAGGACTACCTCAGCAAGCGCGTGATCGGCCAGAAGGAAGC CATCGCCACCGTGTCCGACGCAGTGCGTCGTTCGCGTGCCGGTATCTCCGACCCGAACCGTCCGACCGGATCGTTCCTGT TCCTTGGTCCCACCGGTGTGGGTAAGACCGAACTGGCCAAGGCACTCGCCGACTTCCTGTTCGACGACGAGAAGGCCATG GTCCGCATCGACATGTCCGAATACATGGAGAAGGCTTCGGTCTCGCGCCTGATCGGCGCGGCTCCGGGCTACGTGGGTTA CGAGCAGGGCGGTCAGCTGACCGAAGCCGTGCGCCGTCGCCCGTACTCCGTGGTGCTGTTCGATGAGGTCGAAAAGGCCA ATCCGGAGATCTTCGACGTGCTGCTGCAGGTACTCGATGATGGCCGCCTGACCGATGGTCAGGGCAGGACCGTGGACTTC AAGAACACGATCCTGATCATGACCTCCAACTTGGGCTCGCAGTTCCTCGTGAACGAGGACATGGACGCCGACGCCAAGAA AAGGGCCGTGATGGATGCGGTCCACATGAACTTCAAGCCGGAGTTCCTGAACCGTTTGGACGATATTGTCATGTTCCACC CGCTCACGCGCGAGGAGCTTGGCGGCATCGTGGATATCCAGGTCAAGGGCGTGGCCCAGCGCCTGACCGACCGTCGCATC ACGCTGGACGTCACCGATTCGGCTCGCGAGTGGCTGGCCAACACCGGCTACGACCCGGCCTATGGCGCTCGTCCGCTGCG TCGCTTGGTGCAGACCGAAGTTGGCGACCAGCTGGCCCGCATGTTGCTGGCCGGCAAGGTCCACGACGGCGACACCGTGC TCGTCGACCAGACCGGCGGCGAACACCTGGAGCTCTCCGCCTGGGCGAATGACCAGATTGCCTCCGACGATCCGGACGTG AGCGTAGACAACGTCTCCGAAGACAAGTGA Protein sequence : MEQKFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVVRSLIEAAGGDPQAIGAAVRNALVALPSASGSSTSQ PQASRQLTAAIAQAEKEMQQMGDEYVSTEHLLIGIAASKPNQSAEILEKNGVTAASLRKAVPGVRGGAKVTSPDAEGSYK ALEKYSTDLTAAAKEGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQGKKLIS LDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQIITFIDEIHTIVGAGAAEGSMDAGNMLKPMLARGELRLIGATTLDEY RENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYEAHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAA HLRMELDSSPEEIDELQRKVTRLEMEEMQLKKAEDPASKERLGKLQAELADTREKLSGLKARWDAEQAGHNKVGDLRAKL DDLRVQADKFTREGNLAEASKILYGEIPAIQKELAAAESADAESADAGAENPADEPMVPDRVDADSVAEIVSDWTGIPVG RLMQGENEKLLHMEDYLSKRVIGQKEAIATVSDAVRRSRAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAM VRIDMSEYMEKASVSRLIGAAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTVDF KNTILIMTSNLGSQFLVNEDMDADAKKRAVMDAVHMNFKPEFLNRLDDIVMFHPLTREELGGIVDIQVKGVAQRLTDRRI TLDVTDSAREWLANTGYDPAYGARPLRRLVQTEVGDQLARMLLAGKVHDGDTVLVDQTGGEHLELSAWANDQIASDDPDV SVDNVSEDK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 4e-110 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_007555572.1 | ClpB protein | VFG2084 | Protein | 2e-113 | 42 |
| clpB | YP_007555572.1 | ClpB protein | VFG2076 | Protein | 3e-122 | 41 |
