Gene Information

Name : tctD (AZKH_0875)
Accession : YP_007550188.1
Strain : Azoarcus sp. KH32C
Genome accession: NC_020516
Putative virulence/resistance : Virulence
Product : two-component system, OmpR family, response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 953869 - 954555 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
ATGCGGATTCTTCTGGCTGAAGATGATTTCGTCATCGCTGACGGTCTGGGCCGCGCCCTGAGGCGAAGCGGCTTTGCGGT
CGATCACGTGGCGACCGGCGCCGATGCGGATACCGCTTTGGCATCGCAGCCGTTCGATCTGCTGATCCTCGACCTCGGCC
TGCCGAAGCTGCCCGGCATCGAAGTCCTCAAGCGCCTGCGGGCGCGCAAGTCCGCAATGCCGGTGCTGATCCTCACCGCG
CAGGACGGTGTCGACGATCGCGTGCGGGGTCTCGATGCCGGTGCCGACGATTACCTCACCAAGCCCTTCGCATTGCCCGA
GCTCGAGGCGCGCGTGCGCGCGCTGACGCGCCGCGGCACCGGGCAGGCGCGCTGCATCGAGGTCGGGAGTCTCTCGTACG
ACCAAGCCGACCGGGTCGTGAAGATCAACGGCCAGGTGGTGGAGTTTTCCGCGCGCGAGGTCGGCCTGCTGGAAGTGTTC
ATCCTGCGGGTGGGGCGTCTCGTCAGCAAGGATCAGCTCGTCGATCACCTGTGCGGCTGGGGCGAAGAGGTGTCGAGCAA
CGCGATCGAGGTATATGTCCATCGCCTGCGCAAGAAGCTCGAAGACAGCGGCGTGCGGATCGTGACGGTGCGCGGCCTCG
GCTATTGCCTGGAAACCGTGGATGCTGCCCAGGCGGCGAAGGGCTGA

Protein sequence : 
MRILLAEDDFVIADGLGRALRRSGFAVDHVATGADADTALASQPFDLLILDLGLPKLPGIEVLKRLRARKSAMPVLILTA
QDGVDDRVRGLDAGADDYLTKPFALPELEARVRALTRRGTGQARCIEVGSLSYDQADRVVKINGQVVEFSAREVGLLEVF
ILRVGRLVSKDQLVDHLCGWGEEVSSNAIEVYVHRLRKKLEDSGVRIVTVRGLGYCLETVDAAQAAKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 6e-33 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tctD YP_007550188.1 two-component system, OmpR family, response regulator BAC0083 Protein 1e-30 44
tctD YP_007550188.1 two-component system, OmpR family, response regulator BAC0487 Protein 7e-30 43
tctD YP_007550188.1 two-component system, OmpR family, response regulator BAC0638 Protein 2e-23 42
tctD YP_007550188.1 two-component system, OmpR family, response regulator BAC0347 Protein 6e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tctD YP_007550188.1 two-component system, OmpR family, response regulator VFG0473 Protein 1e-33 43
tctD YP_007550188.1 two-component system, OmpR family, response regulator VFG1389 Protein 6e-25 42
tctD YP_007550188.1 two-component system, OmpR family, response regulator VFG1390 Protein 1e-25 41