Gene Information

Name : AZKH_0060 (AZKH_0060)
Accession : YP_007549388.1
Strain : Azoarcus sp. KH32C
Genome accession: NC_020516
Putative virulence/resistance : Virulence
Product : two-component, sigma-54 specific, transcriptional regulator, Fis family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 74802 - 76193 bp
Length : 1392 bp
Strand : +
Note : -

DNA sequence : 
ATGATGCAGCACGTGCCCGAGGCGGCGACCGGCAAGTCGGTTGCGGTGCCCGAGTTCAGCTGGCAGGCTCATTCGGTACT
CGTCGTCGATGACGAGGAAGGCATGCGCAGCTTCCTCGAACGCGCGCTGCGGCCGCGCTGCGGGCTCGTCGAGTCGGCCC
CGGACGTCGAGCACGCCATGCGCCTGATGGCCCGCCTGCACTTCGATCTGCTGATTCTCCACATCGCCCTGCCCGGCAAG
TCCGGCCTCGACTGGCTGCATGAGCTGCGCGAGGACGGATTCACCGGCGACGTGATCCTGATCACCGCCTTCGCCGACCT
CGACACCGCGATCAACGCCCTGCGTGGTGGCGCATCGGATTTCATCCTGAAGCCTTTCCGCGTCGACCAGATCCTGAATT
CGATCAAGAACTGCTTCCAGCGAGCCCATCTCGCGCGCGAGAACTTCGTCCTGCGGCGTCAGCTCGCGGGACTGAGTGTC
GACATCGACGGGCTGGTCGGCGCGTCGTCCTGCATGGACCAACTGCGCGGCGTGCTGCGACGCGTGGCCCAGACGCCCAG
CACGGTCCTGCTACTCGGCGAATCCGGCACCGGCAAGGAAGTCGCGGCCCGCGCGCTGCACCGCATGAGTCCGCGCGCTC
AGCGACCCTTTGTGCCGCTCAACTGTGCGGCAATCGCGGCCGACCTGATCGAGAGCGAACTCTTCGGTCACGTGAAGGGC
GCCTTCACGGGCGCCACGGACAGCCGCAACGGCCTCTTCTATTATGCCCACGGCGGCACGCTCTTTCTCGACGAAGTCAG
CGAACTGCCCCTGCCACAGCAGTCACGCCTGCTGCGGGTGCTCGAAGAGCGCCGCTTGCGTCCGGTCGGCTCCGAGCGCG
AGATTCCCGTCGACGTGCGCATCGTCGCCGCCTCCAACCGCGACCTCGCGGCTGAAGTCGCGGCCGGACGTTTCCGCCAG
GACCTCTACTTTCGCCTCGCCGTGATGGAAATCGTCATTCCGCCGCTTCGCGAACGCGCCGAAGACATCCCCGAACTCGT
GCGCCACTTCATGAACCTGCTGACCGTCCAACTCGGGATGGCGCCGCTTGCGCTCTCTCACGGGCTGCTCGCCCAGCTCG
CGTCCTATACCTGGCCCGGAAACGTCCGCGAACTACGCAACTTCATCGAGCGTTCGCTGATTCTCGGCGGTTTTCCTGTA
GACGCGCTGAGCGCGCGTGGCGACATGCTCAACGCCGCGCTCGCAATGCCGCTCGAGGAAGTCGAAAAGCGCCACATCCT
GCGCATGCTTGAAGCATGCGGCGGCAACAAGTCCGAGGCCGCACGCCGGCTCGGCGTGTCGCGCAAGACCCTGGAGCGCA
AATGCGCCGAATGGAGCGAGACGGGGGCGTGA

Protein sequence : 
MMQHVPEAATGKSVAVPEFSWQAHSVLVVDDEEGMRSFLERALRPRCGLVESAPDVEHAMRLMARLHFDLLILHIALPGK
SGLDWLHELREDGFTGDVILITAFADLDTAINALRGGASDFILKPFRVDQILNSIKNCFQRAHLARENFVLRRQLAGLSV
DIDGLVGASSCMDQLRGVLRRVAQTPSTVLLLGESGTGKEVAARALHRMSPRAQRPFVPLNCAAIAADLIESELFGHVKG
AFTGATDSRNGLFYYAHGGTLFLDEVSELPLPQQSRLLRVLEERRLRPVGSEREIPVDVRIVAASNRDLAAEVAAGRFRQ
DLYFRLAVMEIVIPPLRERAEDIPELVRHFMNLLTVQLGMAPLALSHGLLAQLASYTWPGNVRELRNFIERSLILGGFPV
DALSARGDMLNAALAMPLEEVEKRHILRMLEACGGNKSEAARRLGVSRKTLERKCAEWSETGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 2e-60 41
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 2e-60 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZKH_0060 YP_007549388.1 two-component, sigma-54 specific, transcriptional regulator, Fis family BAC0467 Protein 2e-65 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZKH_0060 YP_007549388.1 two-component, sigma-54 specific, transcriptional regulator, Fis family VFG1214 Protein 2e-64 42
AZKH_0060 YP_007549388.1 two-component, sigma-54 specific, transcriptional regulator, Fis family VFG1249 Protein 6e-55 41