Gene Information

Name : tctD (AZKH_0450)
Accession : YP_007549772.1
Strain : Azoarcus sp. KH32C
Genome accession: NC_020516
Putative virulence/resistance : Virulence
Product : two-component system, OmpR family, response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 512128 - 512802 bp
Length : 675 bp
Strand : +
Note : -

DNA sequence : 
ATGCGCCTGCTGCTAGTCGAGGACCACGCCGAACTCGCCGAATGGGTCGCCAAGGCCCTGCGCCATGCCGGCTATGCGCT
CGACGTGTTGGACCGCGGCGATCATGCCGATCACGCGCTGAAGAGCCAGAGCTACGACCTCGTGATCCTCGACCTGTCGC
TGCCCGGGCTCGACGGCCTCGAAGTGCTGCGTCGGCTCCGCAGTCGCCAGCAAGGGGCTCCGACCCCGGTGCTGGTGCTC
ACCGCGCGCGGTACGACCGAGGAGCGCGTCAAGGGCCTCAATCTCGGCGCCGACGATTATCTGCCGAAACCCTTCGAGCT
GGCCGAACTCGAAGCGCGCATCAAGGCCCTGCTGCGCCGCAGCGGCAATCTCGTGCCGATGGTGCGCATCGGCCGGCTGG
AGTTCGACACGACGAGCCGGCTCGTCGCCGTCGACGGCAAGCCGCTCGCGCTGACGCCGCGCGAGCTCGCCGTGCTCGAA
GCCCTGCTGTCGCGCGTCGGCCGTCCCGTCGCGCGCGAGGCGTTGTTCGAGAAGGTGTTCGACTTCGATGCCGAGGCGCG
CGTCGAGGCGATCGAGATCTACGTCTCGCGCCTGCGCAAGAAGCTCGAAGGCTCGGGGGTGGTGATCAACACGCTGCGCG
GCCTGGGCTACGTGCTGGCCGAAGCGGCCGCTTGA

Protein sequence : 
MRLLLVEDHAELAEWVAKALRHAGYALDVLDRGDHADHALKSQSYDLVILDLSLPGLDGLEVLRRLRSRQQGAPTPVLVL
TARGTTEERVKGLNLGADDYLPKPFELAELEARIKALLRRSGNLVPMVRIGRLEFDTTSRLVAVDGKPLALTPRELAVLE
ALLSRVGRPVAREALFEKVFDFDAEARVEAIEIYVSRLRKKLEGSGVVINTLRGLGYVLAEAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tctD YP_007549772.1 two-component system, OmpR family, response regulator BAC0083 Protein 1e-36 43
tctD YP_007549772.1 two-component system, OmpR family, response regulator BAC0638 Protein 4e-30 43
tctD YP_007549772.1 two-component system, OmpR family, response regulator BAC0487 Protein 6e-36 42
tctD YP_007549772.1 two-component system, OmpR family, response regulator NC_002516.2.879194.p Protein 8e-33 42
tctD YP_007549772.1 two-component system, OmpR family, response regulator BAC0347 Protein 5e-32 41
tctD YP_007549772.1 two-component system, OmpR family, response regulator U82965.2.orf14.gene. Protein 1e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tctD YP_007549772.1 two-component system, OmpR family, response regulator VFG1390 Protein 4e-33 42
tctD YP_007549772.1 two-component system, OmpR family, response regulator VFG0473 Protein 5e-36 41
tctD YP_007549772.1 two-component system, OmpR family, response regulator VFG0596 Protein 5e-36 41