Gene Information

Name : qseB (AZKH_3437)
Accession : YP_007552702.1
Strain : Azoarcus sp. KH32C
Genome accession: NC_020516
Putative virulence/resistance : Virulence
Product : two-component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3824158 - 3824820 bp
Length : 663 bp
Strand : +
Note : -

DNA sequence : 
ATGAGACTCCTGCTAATCGAAGACGATCCCATGATCGGCGCCGGCGTGCAGCAGGCGCTGCGCCAGGATGGCTATGCCGT
GGACTGGGTGCGCGACGGCATCGCCGCGGAACTGGCCGTGCAGGACAACCCGTACGACATGCTGCTGCTGGATCTCGGGC
TCCCACGTCGCGATGGTATCGAATTCCTGAAGCATATGCGTACTGCCGGGAAGGCGGTCCCGGTCATCATCCTGACTGCC
CGCGACGCTGTCGCCGACCGCGTGCGCGGGCTCGACGCGGGGGCCGACGACTATCTCGTGAAGCCCTTCGATCTCGACGA
ACTCGGTGCGCGCGTGCGCGCCCTGCTCCGCCGCCAACGCGGCCAGGCGAAGCCACTAATCACGCTCGGCGCACTGCAGG
TCGATCCGGCCAGCCACGCGGTGACGCTCAACGGCGTGCCGGTGCGCCTCTCGACCCGGGAGTTCGCACTGCTGTGCGCG
CTCCTCGAACAGCCCGGCAGGCCCTTGTCGCGCAGCCAGCTCGAGGAGCGCATCTACGGTTGGGAAGAGGAGGTCGAAAG
CAACGCCGTGGAGGTGCACATCCACGCGCTTCGGCGCAAGCTCGGCGCCGAATGGATCCGCAACATGCGCGGCGTGGGCT
ACTACGTGGCGGAGCCGGCATGA

Protein sequence : 
MRLLLIEDDPMIGAGVQQALRQDGYAVDWVRDGIAAELAVQDNPYDMLLLDLGLPRRDGIEFLKHMRTAGKAVPVIILTA
RDAVADRVRGLDAGADDYLVKPFDLDELGARVRALLRRQRGQAKPLITLGALQVDPASHAVTLNGVPVRLSTREFALLCA
LLEQPGRPLSRSQLEERIYGWEEEVESNAVEVHIHALRRKLGAEWIRNMRGVGYYVAEPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-36 50
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-25 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 8e-25 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_007552702.1 two-component transcriptional regulator BAC0487 Protein 6e-36 45
qseB YP_007552702.1 two-component transcriptional regulator BAC0083 Protein 7e-32 44
qseB YP_007552702.1 two-component transcriptional regulator BAC0638 Protein 2e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_007552702.1 two-component transcriptional regulator VFG0473 Protein 2e-39 46
qseB YP_007552702.1 two-component transcriptional regulator VFG1389 Protein 4e-28 44
qseB YP_007552702.1 two-component transcriptional regulator VFG0596 Protein 6e-26 43
qseB YP_007552702.1 two-component transcriptional regulator VFG1390 Protein 2e-29 41