Gene Information

Name : ragA (AZKH_3434)
Accession : YP_007552699.1
Strain : Azoarcus sp. KH32C
Genome accession: NC_020516
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3821904 - 3822596 bp
Length : 693 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAATACTCCTCGTCGAAGACGATCCGCAGCAGGCCCGTTACATCTGCAAGGGATTGCAGGAGGGCGGCCACACGGT
CGACGTCGCCGGCGACGGACGCGAGGGGCTGTTTCTCGCCACCACTGAAACCTACGACGCGCTGGTGCTCGACCGGATGC
TGCCGCGCGTCGATGGCCTGACGGTATTGCGTACGCTGCGAGCGTCGGACATCACGACGCCGGTCGTGATCCTCAGTGCG
CTGGGCGAGGTCGATGATCGCGTCGCGGGCCTGCGGGCCGGGGGCGACGATTACCTCGTCAAACCGTTTTCGTTGATCGA
GCTGCTTGCCCGGCTCGAAGCCTTGCAGCGGCGTGGCACGCCCGCGGCGCGCGAGAGCGCCGAGCGCACGCGGCTGGTCG
TGGCCGATCTCGAAATGGATCTCCTGCGCCGCGGCGTGTCGCGGGGCGGCCGGCGCATCGAGCTGAAACCGAAGGAGTTC
CAGCTGCTGGAATTCCTGCTGCGCCATTCGGACCAGGTCGTCACGCGGGCGATGCTGCTCGAAGCGGTATGGAATTACCA
TTTCGACCCGCAGACGAACGTGATCGACGTGCACATCTCGAACCTGCGCGCGAAGATCGACCTGCCCGGGCTGCCTCCGC
TGATCCACACGGTACGCGGCGCCGGTTACCGGCTTGGTGCCGATGCCGCCTAG

Protein sequence : 
MKILLVEDDPQQARYICKGLQEGGHTVDVAGDGREGLFLATTETYDALVLDRMLPRVDGLTVLRTLRASDITTPVVILSA
LGEVDDRVAGLRAGGDDYLVKPFSLIELLARLEALQRRGTPAARESAERTRLVVADLEMDLLRRGVSRGGRRIELKPKEF
QLLEFLLRHSDQVVTRAMLLEAVWNYHFDPQTNVIDVHISNLRAKIDLPGLPPLIHTVRGAGYRLGADAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-35 48
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 9e-35 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ragA YP_007552699.1 two-component response regulator BAC0347 Protein 3e-35 49
ragA YP_007552699.1 two-component response regulator BAC0111 Protein 2e-40 49
ragA YP_007552699.1 two-component response regulator BAC0125 Protein 5e-39 48
ragA YP_007552699.1 two-component response regulator BAC0197 Protein 3e-34 48
ragA YP_007552699.1 two-component response regulator BAC0083 Protein 7e-36 47
ragA YP_007552699.1 two-component response regulator BAC0638 Protein 2e-29 47
ragA YP_007552699.1 two-component response regulator BAC0308 Protein 6e-33 45
ragA YP_007552699.1 two-component response regulator HE999704.1.gene1528. Protein 2e-29 45
ragA YP_007552699.1 two-component response regulator AE016830.1.gene1681. Protein 7e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ragA YP_007552699.1 two-component response regulator VFG1389 Protein 2e-30 49
ragA YP_007552699.1 two-component response regulator VFG0596 Protein 5e-36 48
ragA YP_007552699.1 two-component response regulator VFG1390 Protein 5e-32 46