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Name : gabD (AZKH_3024) Accession : YP_007552299.1 Strain : Azoarcus sp. KH32C Genome accession: NC_020516 Putative virulence/resistance : Virulence Product : succinate semialdehyde dehydrogenase [NAD(P)+] Function : - COG functional category : - COG ID : - EC number : - Position : 3392090 - 3393592 bp Length : 1503 bp Strand : - Note : - DNA sequence : ATGGAACGTTACAACGGACAACTGCTGGGTGAAGGGACGCGTCGTTTTCTGGAGCGGCAGCAGCGGATGCTGATCGGTGG CGAATGGGTCGATGCGGCGAGCGGCGAGACGCTGCCGGTGATCGATCCGGCCTGTGGCGAAAAATTCACCGAGGTGCCGG CGGGCGGGACGGCCGATATCGACCGCGCTGTCGCGGCCGCACGGCGTGCCTTCGAGTCCGGCGACTGGGCGAAGATGCGT CCGGTCGACCGCGAGCGCCTGTTGCTGAAATTTGCCGACCTCGTCGAGGCGAACGCGCAGGAACTGGCCGAGATCGAGTC GCTCGACAACGGCAAGCCGGTGACGATGGCGCGTCACGTCGACGTCGCGCTGGTGATCGATTTCCTGCGCTACATGGCGG GCTGGGCGACGAAGATCGAAGGTTCGACAATGGATGTGTCGGTGCCGATCATCCGCGACCGCGAGTTCTTCGGCTTCACG CGGCGCGAGCCGGTCGGCGTCGTCGGCGCGATCATCCCGTGGAACTTCCCGCTGCTGATGGCGGCGTGGAAGGTTGCGCC GGCGCTGGCGACAGGCTGCACGATGGTGCTGAAGCCCGCCGAGGAGACGCCGCTCTCCGCGCTGCGCTTCGCGGAGCTCG CGCTCGAGGCGGGCTACCCGGCGGGCGTGCTGAACGTCGTCACCGGCCTCGGCCACACGGCCGGAGCGGCGCTCGCGTCG CACAAGGGTATCGAAAAGGTCGCCTTCACCGGCTCGACCGAGATCGGCAAGCTCGTTGGCAAGGCGGCACTCGACAACAT GACGCGAGTGTCGCTGGAACTGGGCGGCAAGAGCCCGGTGATCGTGCTCGACGACGCGGACGTCAGCCAGGCGGCCGCGG GTGCGGCGCAGGCGATCTTCTTCAACCAGGGCCAGGTGTGCACGGCCGGTTCGCGCCTCTTCGTGCATAAGAGCCGCTTC GAGCAGGTCGTCGAAGGGCTGGCCGGCATCGCATCGAGCATGAAGATCGGTGCCGGTATCGACCCGACGACGCAGATCGG GCCGCTCGTGTCGGCCACGCAGCAAAAGCGTGTGCTCGGCTACATCGAGAGTGGCTTTGCGGAAGGTGCGCGCGCGGCGA CCGGCGGCGCGGCGGGCGAGGGCGCGGGCTACTTCGTGAAGCCGACGGTGCTGGTCGATACGACGGACGACATGAAGGTC GTGCGCGAAGAGATCTTCGGGCCGGTTGTCGTCGCCATGCCTTACGACGATCTCGACGAGGTTGCGCGCCGCGCGAACGA CACGCCCTACGGCCTCGCCGCGAGCATCTGGTCGAACGACCTCGCGCGCGTGCATCGCCTGATCCCGAAGATTCAGGCCG GCACCGTGTGGGTGAACTGCCACAACATTCTCGACAACGCGATGCCTTTCGGCGGCTTCAAGCAGTCCGGCATCGGTCGC GAGATGGGGCGCGCGGTGCTTGATCTGTACACCGAATCCAAGTCCGTGATCATGGCGCTGTGA Protein sequence : MERYNGQLLGEGTRRFLERQQRMLIGGEWVDAASGETLPVIDPACGEKFTEVPAGGTADIDRAVAAARRAFESGDWAKMR PVDRERLLLKFADLVEANAQELAEIESLDNGKPVTMARHVDVALVIDFLRYMAGWATKIEGSTMDVSVPIIRDREFFGFT RREPVGVVGAIIPWNFPLLMAAWKVAPALATGCTMVLKPAEETPLSALRFAELALEAGYPAGVLNVVTGLGHTAGAALAS HKGIEKVAFTGSTEIGKLVGKAALDNMTRVSLELGGKSPVIVLDDADVSQAAAGAAQAIFFNQGQVCTAGSRLFVHKSRF EQVVEGLAGIASSMKIGAGIDPTTQIGPLVSATQQKRVLGYIESGFAEGARAATGGAAGEGAGYFVKPTVLVDTTDDMKV VREEIFGPVVVAMPYDDLDEVARRANDTPYGLAASIWSNDLARVHRLIPKIQAGTVWVNCHNILDNAMPFGGFKQSGIGR EMGRAVLDLYTESKSVIMAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 1e-77 | 47 |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 1e-68 | 42 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 7e-72 | 42 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 7e-72 | 42 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 7e-72 | 42 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 1e-71 | 42 |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 9e-64 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gabD | YP_007552299.1 | succinate semialdehyde dehydrogenase [NAD(P)+] | VFG0082 | Protein | 5e-69 | 42 |
