Gene Information

Name : rkpR/bexC/ctrB (AZKH_0252)
Accession : YP_007549574.1
Strain : Azoarcus sp. KH32C
Genome accession: NC_020516
Putative virulence/resistance : Virulence
Product : capsule polysaccharide biosynthesis
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 286215 - 287351 bp
Length : 1137 bp
Strand : -
Note : -

DNA sequence : 
ATGACCGATACCTCAAGCAAACGCTCCGGCCTGATGCCGGCCGGCCTGCGCAACCTCCTCGGGAATAAGCTGTTCCTGCT
TACGACCGTCATCCCGACTGTAATCGCGATCCTCTACTTCGGCCTCATCGCCTCGGACGTCTACATCGCCGAATCCCGCT
TCGTCGTTCGAAGCCCCGAGCGACAAACCTCCTCGCCACTCGGCCTGATCCTGAAGGGTGCCGGCTTTTCGCGCGCGCAA
GACGATTCGTATGCGGTCCAGGACTATATCCTGTCCCGCGACGCTCTCAAGGCGCTCGACAGCGAACTGAAGGTTAGGGA
ATCCTTCTCCTCCAACAAGGTCGACGCCTTCAGCCGCTTCGCCGCAATCGACTGGGACAATAGCTTTGAAGCTTTCCATC
AGTACTACCAGAAGAAGATCGGAGTACAGATCGATTCGGCATCATCGATTACGACCCTGACCACACGTGCCTTTTCGGCG
GACGAGGCTCACGCAATGAATCTGCGCCTGGTCGAAATGGCCGAAGCGCTCGTCAACAAACTCAACGAACGCGGGCGGCA
AGACATGATCCGCTTTGCTGCCGATGAAGTCGCCCAGGCGGAGAAAAAGGCGAAGGCGGCGGGACTGGCGCTGGCGAAAT
ACCGCAACGACAAGGGCGTAATCGACCCCGAGAAGCAGTCCGCCATCCCGCTGCAGCAGATCGCCAAGATGCAGGACGAA
CTGCTCACTACACGGGCCATGGTCATGCAGCTCGAAAAAGTCGCCAAGGCCAACCCCCAACTTCCTATCCTGCGCCAACG
CGTCACGCTGCTGGAACAGGAAATCAAGTCCGAAACCGATCGCGTCACAGGCAGCGACAAATCTCTCGCAGGCAAAACCG
CCGAATTCCAGAGATTTGTTCTTGAAAAGGAATTCGCCGAAAAGATGCTCGCCAGCGCAATGTCAACGCTCGAAATGGCG
CGCAATGAGGCGCAGCGCAAGCAATTGTATCTAGAGCGCATCGTACAACCGAGCGTACCTGACGCTCCCGTAGAGCCACG
TAGGGTCCGTGGCATTGCTGCCACTTTTGTTCTTGGACTGATCCTTTTTGGAATCATGACAATGCTGCTGGCCGGAATCC
GGGAGCATGTGGATTGA

Protein sequence : 
MTDTSSKRSGLMPAGLRNLLGNKLFLLTTVIPTVIAILYFGLIASDVYIAESRFVVRSPERQTSSPLGLILKGAGFSRAQ
DDSYAVQDYILSRDALKALDSELKVRESFSSNKVDAFSRFAAIDWDNSFEAFHQYYQKKIGVQIDSASSITTLTTRAFSA
DEAHAMNLRLVEMAEALVNKLNERGRQDMIRFAADEVAQAEKKAKAAGLALAKYRNDKGVIDPEKQSAIPLQQIAKMQDE
LLTTRAMVMQLEKVAKANPQLPILRQRVTLLEQEIKSETDRVTGSDKSLAGKTAEFQRFVLEKEFAEKMLASAMSTLEMA
RNEAQRKQLYLERIVQPSVPDAPVEPRRVRGIAATFVLGLILFGIMTMLLAGIREHVD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrB NP_273136.1 capsule polysaccharide export inner-membrane protein Not tested IHT-A Protein 2e-64 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
rkpR/bexC/ctrB YP_007549574.1 capsule polysaccharide biosynthesis VFG2565 Protein 2e-75 47
rkpR/bexC/ctrB YP_007549574.1 capsule polysaccharide biosynthesis VFG0698 Protein 6e-69 45
rkpR/bexC/ctrB YP_007549574.1 capsule polysaccharide biosynthesis VFG0686 Protein 6e-69 45
rkpR/bexC/ctrB YP_007549574.1 capsule polysaccharide biosynthesis VFG0256 Protein 9e-65 45