Gene Information

Name : rkpT/bexB/ctrC (AZKH_0251)
Accession : YP_007549573.1
Strain : Azoarcus sp. KH32C
Genome accession: NC_020516
Putative virulence/resistance : Virulence
Product : capsule polysaccharide export inner-membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 285422 - 286225 bp
Length : 804 bp
Strand : -
Note : -

DNA sequence : 
ATGTGGATTGATGGCATGACCCACCCGACTCTATCCAGAAGCCTGCGCATTCAGTCTCAGGTCATTGGCGCGCTTCTCAT
GCGAGAGGTGCTGACTCGCTATGGGCGTCACAACATTGGTTTCATGTGGCTCTTCGTGGAACCGATGATGTTTACCTTGG
GCGTAACAGCCTTGTGGTCGCTCGCGGGTTTGCATAGTGAATCGCCGATCCCGATCGTTGCCTTTGGCGTAACGGGATAT
TCGTCAGTACTTCTCTGGCGAAACATGCCCGCACGGTGTGTCCAGGCGATCGAACCCAATCTCGCCCTCATGTACCACCG
TAACGTAAAGGTCATCGATATTTTTGCGGCGCGCCTGATACTGGAAGCGGCCGGAGCAACCATTTCCTTCACGCTTCTGA
GCCTTCTGTTCATTTCCCTTGGCTGGATGCAGCTTCCACAGGATATTTTCAAGGTCCTCTTCGGCTGGTTCATGCTGGCG
TGGTTCGGAATGGCACTTGCATTATCCCTGGGCAGCCTCTCAAGCAGATCTGAGCTTATTGAGAAGCTTTGGCACCCGGC
ATCCTATCTCCTGTTCCCTCTCTCTGGCGCCGCATTCATGGTGGAGTGGTTACCGACTTCAGCGCAAAAAGCGATTGTCT
GGTTTCCGATGGTGCATGGCGTAGAAATTCTCCGCGACGGCTATTTCGGCTCGGTCGTCCCAACACACTACGACATGGCT
TATATGGCGTTCATCAGCCTCTTGCTGACGTTTTTCGGGCTTGCACAGGAACGCGTCGCAAGCAAACAAGTTACGCCCGA
ATGA

Protein sequence : 
MWIDGMTHPTLSRSLRIQSQVIGALLMREVLTRYGRHNIGFMWLFVEPMMFTLGVTALWSLAGLHSESPIPIVAFGVTGY
SSVLLWRNMPARCVQAIEPNLALMYHRNVKVIDIFAARLILEAAGATISFTLLSLLFISLGWMQLPQDIFKVLFGWFMLA
WFGMALALSLGSLSSRSELIEKLWHPASYLLFPLSGAAFMVEWLPTSAQKAIVWFPMVHGVEILRDGYFGSVVPTHYDMA
YMAFISLLLTFFGLAQERVASKQVTPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrC NP_273137.1 capsule polysaccharide export inner-membrane protein Not tested IHT-A Protein 8e-45 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
rkpT/bexB/ctrC YP_007549573.1 capsule polysaccharide export inner-membrane protein VFG2564 Protein 3e-71 60
rkpT/bexB/ctrC YP_007549573.1 capsule polysaccharide export inner-membrane protein VFG0257 Protein 3e-45 46
rkpT/bexB/ctrC YP_007549573.1 capsule polysaccharide export inner-membrane protein VFG0685 Protein 3e-45 42
rkpT/bexB/ctrC YP_007549573.1 capsule polysaccharide export inner-membrane protein VFG0697 Protein 3e-45 42