Gene Information

Name : rkpU/wza (AZKH_0237)
Accession : YP_007549559.1
Strain : Azoarcus sp. KH32C
Genome accession: NC_020516
Putative virulence/resistance : Virulence
Product : capsular polysaccharide export protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 266876 - 267925 bp
Length : 1050 bp
Strand : -
Note : -

DNA sequence : 
GTGCCCGCGACGACTCCGATGCCGGTCCAGATTGTGGACATATCTGACGGGCTTGCCCGCCGGCTGCAGGAGTCCGATAA
GCGGTTGCGTTTCTCGGAAGTCTTGAGTACGCAGGGTGTCGAAAGCTACCTGATAGGGCCCGGTGACGTTGTGCAGGTAT
CGATCTGGGAAGCACCGCCTGCTGCGCTATTCGGCGCGACGATGCTCGATGCCCGGGCCAATGGGGCAGGCACTGCGACC
ACCACCCTTCCTGAGCAAATGGTCGCCTCGGATGGCACAATCACCATTCCATTTGCCGGCGTGATTGCCGCCGGGGGAAG
CTCTCCGCAGCAGATTGAACGCGAAATCACCAAGCGCCTCACCGGACAAGCCAACCAACCCCAGGTACTTGTGCGTGTGG
TGCGCAACAACACGTCAAACGTGACGGTTGTCGGTGACGTAGCGAGCAGCACCCGAATGCCGCTGACCGCCCGTGGCGAA
CGCTTGCTTGATGCACTGGCGGCCGCAGGAGGCGTTCGACAGCCGGTCGGGAAGATGACGATTCAGGTCACCCGCGGATC
ACTCGTCAATGCAATGCCGCTCGATCAGATCATTCAGGATCCTCATCAAAATATCATACTGCGCCCGGGCGATGTGGTCA
CAGCATTGCACCAGCCGCTGAGCCTTACGGTTCTGGGGGCGACAGGTAAGAACGAAGACATACCGTTCGAAGCCAATGGC
ATCACGCTTGCGCAGGCCCTCGCGCGCGCGGGTGGCCTGCAGGACGCGCGAGCCGACGCGCGCGGCGTGTTTCTCTTCCG
TTTCGAGGATCCATCCGTCCTCGGCGCCCAAGGCAGCAATTCTCTGCTCACGCCCGACAACAAGGTGCCAGTCGTGTATC
GCGTCGACCTCACGGACCCGCGCAGCTTTTTCATCGCGCAGGGTTTTCCGGTCCGGAACAAGGATGTCATGTATGTCGCC
AACGCACCAGCTTCGGAACTTCAGAAGTTTCTCAACATCCTGACGTCGTCGCTGTTTTCGGTTAATTCACTGATTAGCCT
GGGACGTTAA

Protein sequence : 
MPATTPMPVQIVDISDGLARRLQESDKRLRFSEVLSTQGVESYLIGPGDVVQVSIWEAPPAALFGATMLDARANGAGTAT
TTLPEQMVASDGTITIPFAGVIAAGGSSPQQIEREITKRLTGQANQPQVLVRVVRNNTSNVTVVGDVASSTRMPLTARGE
RLLDALAAAGGVRQPVGKMTIQVTRGSLVNAMPLDQIIQDPHQNIILRPGDVVTALHQPLSLTVLGATGKNEDIPFEANG
ITLAQALARAGGLQDARADARGVFLFRFEDPSVLGAQGSNSLLTPDNKVPVVYRVDLTDPRSFFIAQGFPVRNKDVMYVA
NAPASELQKFLNILTSSLFSVNSLISLGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrA NP_273135.1 capsule polysaccharide export outer membrane protein Not tested IHT-A Protein 8e-46 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
rkpU/wza YP_007549559.1 capsular polysaccharide export protein VFG2566 Protein 3e-71 57
rkpU/wza YP_007549559.1 capsular polysaccharide export protein VFG0255 Protein 3e-46 43
rkpU/wza YP_007549559.1 capsular polysaccharide export protein VFG0687 Protein 4e-50 41
rkpU/wza YP_007549559.1 capsular polysaccharide export protein VFG0699 Protein 4e-50 41