Gene Information

Name : AZKH_1960 (AZKH_1960)
Accession : YP_007551249.1
Strain : Azoarcus sp. KH32C
Genome accession: NC_020516
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2205937 - 2207490 bp
Length : 1554 bp
Strand : +
Note : -

DNA sequence :
ATGGTCGTCGGCCATTTGCAGTCAGGAGAAAACATGCTTTATGCACCACCCGGCTCCGCCGGTGCCAAGACCGCCTACAA
GGCCAGGTACGACAATTTCATCGGTGGCAGGTGGGTTGCGCCGGTGAGGGGCGAATACTTCAGTGTCATCACTCCGATTT
CGGGCAAGCCGTACACGATGGCTGCCCGTTCGACTGCCGAGGACGTGGAGCTGGCGCTCGACGTCGCGCATGCCGCCGCC
GACAAGTGGGGCCGCAGCTCGGCCGCCGAACGCGCCGGCATCCTGCTGAAGATCGCCGACCGCATCGAGCAGAACTTGGA
AGTGCTGGCCTACGCCGAGACCGTCGACAACGGTAAGCCGATCCGCGAATCGCTCTTCGCCGACCTGCCGCTCGCCGTAG
ACCAGTTCCGCTATTTCGCGGGCTGCCTTCGCGCGCAGGAAGGCTCGGTGTCGGAGATCGACGAGACCACCGTCGCCTAT
CACTTCCATGAGCCGCTCGGCGTCGTCGGCCAGATCATCCCGTGGAACTTCCCGCTGCTGATGGCCGCCTGGAAGCTGGC
CCCGGCGCTCGGCGCCGGCAACTGCGTCGTGCTCAAGCCGGCCGAGTCGACCCCGATCAGCATCCTGGTGCTGGTCGAGC
TGATTGCCGACCTGCTGCCGCCGGGCGTGTTGAACGTGGTCAACGGCTTCGGCCGCGAGGCTGGCATGCCGCTGGCGACC
TCCAAGCGCATCGCAAAGATCGCCTTCACCGGGTCGACCTCGACCGGCCGCGTGATAGCGCAGGCCGCCGCCAACAACCT
GATCCCGACGACGCTGGAACTGGGCGGCAAGTCGCCGAACATCTTCTTCGAGGACGTGATGGCCGCGGACGATGGCTTCC
TCGACAAGGCCGTCGAGGGCCTGGTGATGTTCGCGCTGAACCAGGGAGAGGTATGCTCCTGCCCGTCGCGCGCACTCATC
CAGGAGTCGATCTACGATGCCTTCATCGAGCGCTGTCTCGACCGCGTCCGCGCGATCAAGCAGGGGAATCCGCTGGACAT
CACGACTATGGTCGGCGCCCAAGCTTCGCAAGAGCAGATGGCGAAGATCCTGGCCTACATCGACGTCGGTCGCCAGGAGG
GGGCCGAAGTGCTGGTCGGTGGCGGCCCGGCGCGGGTCGAGGGCGAGTTTTCGGGCGGCTATTACGTGCAGCCGACCCTG
TTCAAGGGGCACAACCGGATGCGGGTGTTCCAGGAGGAAATCTTCGGCCCGGTGCTGGCGGTGACGACCTTCAAGGACGA
GGCAGACGCGTTGGCTATTGCCAATGACACGCCCTACGGGCTGGGCGCCGGCGTCTGGAGTCGCAATGGTAACGTCGCCT
ATCGCATGGGCCGCGCGATCAAGGCCGGTCGCGTGTGGACCAACTGTTACCACGCCTATCCGGCGCACGCCGCCTTCGGC
GGTTACAAGGAGTCAGGCTTCGGGCGCGAGAACCATAGGATGATGCTTGATCATTATCAGCAGACGAAGAATTTGCTGGT
CAGCTATAACGAGCAGAAGCTAGGGTTCTTCTGA

Protein sequence :
MVVGHLQSGENMLYAPPGSAGAKTAYKARYDNFIGGRWVAPVRGEYFSVITPISGKPYTMAARSTAEDVELALDVAHAAA
DKWGRSSAAERAGILLKIADRIEQNLEVLAYAETVDNGKPIRESLFADLPLAVDQFRYFAGCLRAQEGSVSEIDETTVAY
HFHEPLGVVGQIIPWNFPLLMAAWKLAPALGAGNCVVLKPAESTPISILVLVELIADLLPPGVLNVVNGFGREAGMPLAT
SKRIAKIAFTGSTSTGRVIAQAAANNLIPTTLELGGKSPNIFFEDVMAADDGFLDKAVEGLVMFALNQGEVCSCPSRALI
QESIYDAFIERCLDRVRAIKQGNPLDITTMVGAQASQEQMAKILAYIDVGRQEGAEVLVGGGPARVEGEFSGGYYVQPTL
FKGHNRMRVFQEEIFGPVLAVTTFKDEADALAIANDTPYGLGAGVWSRNGNVAYRMGRAIKAGRVWTNCYHAYPAHAAFG
GYKESGFGRENHRMMLDHYQQTKNLLVSYNEQKLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-154 64
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-162 63
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-162 63
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-162 63
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-161 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZKH_1960 YP_007551249.1 aldehyde dehydrogenase VFG0082 Protein 2e-154 64