Gene Information

Name : tns (AZKH_1636)
Accession : YP_007550928.1
Strain : Azoarcus sp. KH32C
Genome accession: NC_020516
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1827115 - 1828017 bp
Length : 903 bp
Strand : +
Note : -

DNA sequence :
ATGAACAGTTTCATCGACACGCACCGCGAGCGCTTCGGGGTCGAGCCGATCTGCAGGGTGCTGCAGGTTGCCCCGTCGGC
CTATCGTCGCGCGGTAGCCCGTCGGCGTGATCCCGCCTTGCGCTGTCTGCGAGCCCGTCGCGACGAGGTGCTGGAGGGGC
ACATCGAGCGGATCTGGGAGGCGAATCTGCAGGTGTATGGAGCGCGCAAGGTATGGCGGCAGTTGCAGCGGGAAGGCGTC
GAGGTCGCCCGCTGCACGGTTGAACGGCTGATGCGTGCCCAGGGTTTGCGCGGTGCAATGCGCGGAAAGGCGCTGCGGAC
CACCCGCCCGGATTCGATTGCGCCGTGTCCGCTCGATCGCGTCAATCGCCAGTTCGTCGCCCAGCGCCCAAACCAATTGT
GGGTGTCCGACTTTACGTATGTCTCGACCTGGCAGGGGTTCGTGTACGTCGCCTTTGTGGTCGACGTCTTCGCCCGCTAC
ATCGTGGGTTGGCGCGTCAGTCGATCCATGCAGACCGAGTTCGTCCTCGACGCCCTGGAGCAGGCCCTGTGGGCTCGTCA
GCCTGAACGTAATGCCTTGGTCCATCACAGCGATCGCGGTTCCCAGTACGTCTCGATCCGATACAGCGAACGTTTGGCAG
AAGCGGGCATCGAGCCGTCGGTCGGCAGCCGTGGTGATAGCTACGACAATGCCCTGGCCGAAACCATCAACGGCCTGTAC
AAGGCCGAAGTCATCCACCGGCGAGGGCCTTGGAAGAGCGTTGAAGCGGTCGAGTTGGCCACCCTCGAATGGGTCTCATG
GTTCAACCATCACCGCTTGCTTGAGCCGATCGGGTACATTCCTCCCGCCGAAGCCGAGGCAAACTACTACCGCAACCTCA
GCGAGCAGGCGGTCGCCGCCTGA

Protein sequence :
MNSFIDTHRERFGVEPICRVLQVAPSAYRRAVARRRDPALRCLRARRDEVLEGHIERIWEANLQVYGARKVWRQLQREGV
EVARCTVERLMRAQGLRGAMRGKALRTTRPDSIAPCPLDRVNRQFVAQRPNQLWVSDFTYVSTWQGFVYVAFVVDVFARY
IVGWRVSRSMQTEFVLDALEQALWARQPERNALVHHSDRGSQYVSIRYSERLAEAGIEPSVGSRGDSYDNALAETINGLY
KAEVIHRRGPWKSVEAVELATLEWVSWFNHHRLLEPIGYIPPAEAEANYYRNLSEQAVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 8e-59 67
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 1e-58 66
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 1e-67 66
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 2e-75 62
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 4e-78 62
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 6e-78 62
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 4e-77 62
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 5e-76 61
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 7e-76 61
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 7e-76 61
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 2e-77 61
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 7e-76 61
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 2e-77 61
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 2e-77 61
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 1e-77 61
Z1638 NP_287141.1 transposase Not tested TAI Protein 8e-75 61
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 6e-75 61
Z1221 NP_286756.1 transposase Not tested TAI Protein 4e-75 61
Z1198 NP_286733.1 transposase Not tested TAI Protein 8e-75 61
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 9e-53 61
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 7e-74 59
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 2e-51 49
CDCE8392_1958 YP_005134489.1 transposase-like protein Not tested Not named Protein 4e-32 43
CDC7B_2035 YP_005163476.1 transposase-like protein Not tested Not named Protein 1e-24 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tns YP_007550928.1 transposase VFG1602 Protein 4e-74 59