Gene Information

Name : fliI (AZKH_1327)
Accession : YP_007550625.1
Strain : Azoarcus sp. KH32C
Genome accession: NC_020516
Putative virulence/resistance : Virulence
Product : flagellar-specific ATP synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1456815 - 1458218 bp
Length : 1404 bp
Strand : -
Note : -

DNA sequence :
ATGAGCACCGCTCACGCGGACGCCTGGACGAAGCACCTGGCCGAGCATCGCCGGCTGGTGAGCTCGATCACTCCTTTCGA
GATATCGGGACGCCTCACGCGGATCAACGGTCTTGTCATGGAAGCCGCCGGCCTTAAGCTGCCGCTCGGCGCCGACTGCC
GGATCATGGCGGCCGGCGGCGCCGTCGTCGAAGCGGAAGTCGTCGGCTTCAACGGCGAACGGCTTTACCTGATGCCCACC
GACGACGTGTTCGGACTCGCGCCCGGTGCTCAGGTCCTGCCCGTCGAACCCCATCCCGCCCGGATTGTGGTCGGCAAGTC
GGCGCCCCCTCGCCGACGTACATCCGATCGCGCCAAACACCTCCCGGTCGGCGACAAGCTGCTGGGCCGCGTCGTCGACG
GCGCCGGCCGGCCGCTAGATGGCCTCGGCCCGCTCGACGGCACGGAAGGACGTTCCCTCCAGAGCCGACCTTTCAATCCG
CTCAGCCGCGCCCCGATCGACACGCCGCTCGACGTCGGGATCCGGGCGATCAACGCCCTCCTCACCGTCGGTCGCGGCCA
ACGCCTGGGCCTCTTCGCCGGCTCGGGCGTCGGCAAATCGGTGCTGATCGGGATGATGGCACGCTATACGGCGGCCGACG
TCATCGTCGTCGGACTGATCGGCGAACGGGGCCGCGAAGTGAAGGAGTTCATCGAGCAGAACCTCGGCGCTGAAGGCCGT
CAGCGTTCGGTCGTCGTCGCCGCCCCGGCCGACACCAGCCCGCTGATGCGCCTGCAGGGCGCGGCCTATGCGACGACCAT
CGCCGAATATTTCCGCGACCAGGGCAAGCAAGTGCTGCTGATCATGGATTCGCTGACCCGTTATGCGATGGCGCAGCGCG
AAATCGCGCTCGCAATCGGCGAGCCGCCGGTCACCCGCGGCTATCCGCCGAGCGTCTTCGCACGCCTGCCGGCCTTGGTC
GAACGCGCCGGCAACGGCCTCGAAGGCGGCGGCTCCATCACCGCCTTCTACACCGTGCTCGCCGAAGGCGACGACCAGCA
GGACCCGATCGCCGACTCGGCGCGCGCGATTCTCGACGGCCACTTCGTCCTGTCGCGTTCGCTGGCCGACCAGGGGCACT
ACCCCGCGATCGACATCGAGCAATCGATCTCACGCGCGATGCATGGCCTCGTCTCGCCCGAGCATTTCGATCTGGTCCGA
CGCTTCAAGCAGATGTTCTCGCGCTACCAGCGTTCCCGCGACCTGATCGCCGTCGGCGCCTACCAGGCGGGCTCAGACCC
GATGCTCGACAAGGCCGTGGCGATGTATCCGAAGCTCGAAGCCTTCCTGCAGCAACGCATCGACGAGCAGGAAACCTATG
CCCGCGCGACGAACCATCTCGGCAGTCTGTTCCTCGCGGGATGA

Protein sequence :
MSTAHADAWTKHLAEHRRLVSSITPFEISGRLTRINGLVMEAAGLKLPLGADCRIMAAGGAVVEAEVVGFNGERLYLMPT
DDVFGLAPGAQVLPVEPHPARIVVGKSAPPRRRTSDRAKHLPVGDKLLGRVVDGAGRPLDGLGPLDGTEGRSLQSRPFNP
LSRAPIDTPLDVGIRAINALLTVGRGQRLGLFAGSGVGKSVLIGMMARYTAADVIVVGLIGERGREVKEFIEQNLGAEGR
QRSVVVAAPADTSPLMRLQGAAYATTIAEYFRDQGKQVLLIMDSLTRYAMAQREIALAIGEPPVTRGYPPSVFARLPALV
ERAGNGLEGGGSITAFYTVLAEGDDQQDPIADSARAILDGHFVLSRSLADQGHYPAIDIEQSISRAMHGLVSPEHFDLVR
RFKQMFSRYQRSRDLIAVGAYQAGSDPMLDKAVAMYPKLEAFLQQRIDEQETYARATNHLGSLFLAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 7e-68 52
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 7e-68 52
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 5e-74 51
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-67 50
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 1e-67 50
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-67 50
escN AAL57542.1 EscN Virulence LEE Protein 6e-69 50
escN YP_003223475.1 translocator EscN Virulence LEE Protein 5e-69 50
escN CAC81862.1 EscN protein Virulence LEE II Protein 4e-69 50
escN YP_003236088.1 translocator EscN Virulence LEE Protein 4e-69 50
escN CAI43874.1 EscN protein Virulence LEE Protein 4e-69 50
unnamed AAL06369.1 EscN Virulence LEE Protein 7e-68 50
escN AAC38383.1 EscN Virulence LEE Protein 9e-69 50
escN AAC31513.1 L0034 Virulence LEE Protein 7e-69 50
escN NP_290268.1 hypothetical protein Virulence LEE Protein 1e-68 50
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 7e-69 50
ECs4568 NP_312595.1 EscN Virulence LEE Protein 1e-68 50
escN AAK26715.1 EscN Virulence LEE Protein 6e-69 50
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 5e-69 50
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-72 45
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 2e-72 45
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-72 45
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-72 45
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 4e-74 45
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 4e-74 45
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-74 45
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-73 45
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 7e-61 45
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 4e-64 43
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 5e-65 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_007550625.1 flagellar-specific ATP synthase VFG2331 Protein 7e-129 68
fliI YP_007550625.1 flagellar-specific ATP synthase VFG2499 Protein 7e-133 66
fliI YP_007550625.1 flagellar-specific ATP synthase VFG1254 Protein 3e-116 62
fliI YP_007550625.1 flagellar-specific ATP synthase VFG0515 Protein 6e-68 50
fliI YP_007550625.1 flagellar-specific ATP synthase VFG0812 Protein 4e-69 50
fliI YP_007550625.1 flagellar-specific ATP synthase VFG0730 Protein 5e-69 50
fliI YP_007550625.1 flagellar-specific ATP synthase VFG0048 Protein 2e-79 44
fliI YP_007550625.1 flagellar-specific ATP synthase VFG0192 Protein 4e-74 43
fliI YP_007550625.1 flagellar-specific ATP synthase VFG2144 Protein 4e-75 43