Gene Information

Name : WQG_2630 (WQG_2630)
Accession : YP_007547338.1
Strain : Bibersteinia trehalosi USDA-ARS-USMARC-192
Genome accession: NC_020515
Putative virulence/resistance : Virulence
Product : Capsule polysaccharide modification protein HcsB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 248624 - 249871 bp
Length : 1248 bp
Strand : +
Note : Capsule polysaccharide export protein COG3562; Capsule polysaccharide modification protein HcsB of Proteobacteria UniRef RepID=A3N2Z4_ACTP2

DNA sequence : 
ATGATTAACCATTATTTAGATGACCTGGTCACTTCATCAAAACGCATTCTTTTGCTCCAAGGGCCAATAGGAGCGTTTTT
CTATGAATTTTCGAAATGGTTACAAGCTCAACAACGCACAGTATTTAAAATAAATTTTAATGCTGGCGATGAGCGTTTTT
ATCCTGCAGGCTCTTATACTATTGCATATCGCAATACACTTGGGGAATTTGCAGATTTTTTATATGAATTTTGCCAATGT
GAGCAGATTGACAGCTTGGTTTGTTTTGGTGATAACCGTAAATATCACAAAATAGCCAAACAAGTTGCTGATCAGCTTGG
GTTAGCATTTTGGGTATTTGAAGAAGGCTATTTTCGTCCTGATTATATTACGCTTGAAAAATCAGGGGTGAATGTTTTTT
CGCCGATTCCAAGAACGGCAGACTATTTCCTTGCCATTGAGCCAGAATTAACTGAAATTGAAAAGCCTGAGCGAGTTTCC
AAAGGCTTTTTCCCAATGGCAAAACGAGCAATTCAATACTATTTCAGTGGCTATTTTTGCCGTTGGAAGTACCCACATTA
TCAGCATCATCGTTTTTTGAATGTGGGTTACTACATTAAATTATGGGGCATTTCATTGGTAAAACGCCTTTGTTATGCGA
TTCATGATCGCAATTTTGCTAAGCGAGTGGAGGCTGGCGAATTTGGGGAATTTTTTATTGTGCCATTGCAGGTTTATGAT
GACAGCCAAGTTGTTGTGCATAGTGATTATCCCAGCGTTGAGGCTTTTTTAAGTGAGGTGCTAGAGTCATTTAGTCGTTT
TGCCCCTGAGCACTGTAATTTAATTATTAAGCATCATCCAATGGATCGCGGTTTTTTAGATTATGCAGAGATCATTGCGC
AATTTGAGCAGCGTTATCCAAATTTGCAAGGGCGTGTGTTTTATATTCATGATGTACCAATGCCTGTATTTTTACGTCAC
GGTAAAGGAATGGTTACACTCAACAGTACCAGTGGGATTTCCGGCTTATTGCATTCGATGCCGGTGATGACGCTAGGTCG
AGCTAACTACGATTTTGTAGGGCTAACGCATCAGGGGGATTTAGATAGCTTTTGGCAGAATCCACAAGCGCCTGATCGCA
AAGTTTTTGAAAATTATCACCGCTTCCATTTAAATCGTACTCAGATTAATGGCAATTTTTATAATCGCACTATTTTGCGT
TTTCCATATAATCAAGCGGTAGCCACCCAAAGTTATGAGAAGAACTAA

Protein sequence : 
MINHYLDDLVTSSKRILLLQGPIGAFFYEFSKWLQAQQRTVFKINFNAGDERFYPAGSYTIAYRNTLGEFADFLYEFCQC
EQIDSLVCFGDNRKYHKIAKQVADQLGLAFWVFEEGYFRPDYITLEKSGVNVFSPIPRTADYFLAIEPELTEIEKPERVS
KGFFPMAKRAIQYYFSGYFCRWKYPHYQHHRFLNVGYYIKLWGISLVKRLCYAIHDRNFAKRVEAGEFGEFFIVPLQVYD
DSQVVVHSDYPSVEAFLSEVLESFSRFAPEHCNLIIKHHPMDRGFLDYAEIIAQFEQRYPNLQGRVFYIHDVPMPVFLRH
GKGMVTLNSTSGISGLLHSMPVMTLGRANYDFVGLTHQGDLDSFWQNPQAPDRKVFENYHRFHLNRTQINGNFYNRTILR
FPYNQAVATQSYEKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lipB NP_273146.1 capsule polysaccharide modification protein Not tested IHT-A Protein 2e-106 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
WQG_2630 YP_007547338.1 Capsule polysaccharide modification protein HcsB VFG0705 Protein 2e-130 63
WQG_2630 YP_007547338.1 Capsule polysaccharide modification protein HcsB VFG0693 Protein 2e-130 63
WQG_2630 YP_007547338.1 Capsule polysaccharide modification protein HcsB VFG0260 Protein 9e-107 54