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Name : WQG_2620 (WQG_2620) Accession : YP_007547337.1 Strain : Bibersteinia trehalosi USDA-ARS-USMARC-192 Genome accession: NC_020515 Putative virulence/resistance : Virulence Product : Capsule polysaccharide modification protein LipA Function : - COG functional category : - COG ID : - EC number : - Position : 246559 - 248613 bp Length : 2055 bp Strand : + Note : Capsule polysaccharide export protein COG3563; Capsule polysaccharide modification protein LipA of Proteobacteria UniRef RepID=LIPM_NEIMA DNA sequence : ATGCGTGGTCTTATTTTCTCATCTGGTATTTTAAACATTCCGCATCTTGCCGCTTTTTTACCTGAAAGTGAGCTGTTGCC TTATGCTCGGTTTCGGCATCAAGCAGTCGAGTGTGTCTATGGCTGGGGATTAAAACCTACGTCATTAAAAGCACGTAATT ATGCCACGCAGCATAATCTGCCTTATATCGCCTTAGAAGACGGTTTTTTACGTTCAACTGGACTTGGCGTAGAAGGCTAT CCACCTTTTTCGATGGTAGTGGACGATCTCGGTATTTATTATGATACTCGCCAGCCATCTCGTTTAGAACAGCTGATTTT AGCGGCGGATCAGTCTGCTGAATTGTTGCAGCAGGCGAGCCTTGCTTTGGCTCAAATCCGTCAATTTCGTCTTTCCAAAT ATAATCATGCGCCTGATTTTGCTCAATCGGTTTCTGCTGAACGCCCGATCGTGCTGGTGCTCGATCAGACTTTTGGGGAT ATGGCGGTGCAATGTGGGCAGGCTGATGCCGCTTGCTTTGAACAAATGTTACACGCTGCTATAGCGGAGAATCCTCATGC TGAGATTTGGGTGAAGACTCATCCAGATGTGATTTCAGGCAAGAAAAAAGGCTATCTTACCCAGATAGCGAAGGGAGAAA ATGTTCGTCTTTTGGCACAAGATTGCAATCCGTTATCGCTATTAGCGCAGGCGGAAAAAGTCTATTGTGTGACATCGCAA ATGGGTTTTGAGGCATTGATGCTTGGTAAAACAGTGGTGACATTTGGTGTGCCTTGGTTTGCAGGGTGGGGAATAAGCGA TGATCGCCATCCTAATGTCACAGCATTACAAACTAATGGACGGCGGGCTGAGCGTACCTTCTTGCAGCTATTTGCCGCGG CTTATTTGCAGTATAGCCGCTATATTGATCCTAATCGTGGTACAAGTGGCTCTATTTTTGATGTGATTGATTATCTGCAT CGCGCTCGCCAGTTTGGCGAACGTGTGCGTGGGACACTTTATTGCGTGGGAATGTCACTGTGGAAACGAGCAGTAATCAA GCCCTTCTTTCGTTTTCCTCAGTGTCGGGTTATTTTCACCTCGCTTGCCCATTTGCAAAAAAACGTGAAAAAACAACCGC TTGCTAAAGATGCTAAATTATTAATTTGGAGTAATGGCAAGCCCGAGGTATTAGCATTTGCTCAACAATATCAGTTACCA ATTCTACGAATGGAAGATGGCTTTATTCGTTCAGTAGGGCTTGGTTCAAATTTGGTTGCGCCACTTTCACTGGTGACAGA TGATCTTGGTATCTATTTTAATGCACAAATGCCTTCGCGTTTAGAGTATATCTTGCAAAATCAGCAGTTTTCTAAGAGCG ATTTAGCCCGAGCTAGCGCATTACGCCAGCAGTTGATTCAAGCAAATATTGGCAAATATAACGTAGGAAGTGATGGTTTT TCACTTAATGCGCAGGGAAAAAGAACGTTATTAGTGCCTGGGCAGGTAGAAGACGATGCCTCAATTCGCTCTGGCTCACC CGTGATTAAGCGTAATTTAGATCTGCTAAAAGCGGTACGTGCACAGAATCCAGATGCTTATATTCTCTATAAACCGCACC CTGATGTAGTCAGTGGTAATCGTATTGGAAAAATTGATGCGCAAGTGGCTCTGCAATATGCGAATGAAATTGTTGAAAAT GCGAATATTCTTGATTGCATTATGCAGGTTGATGAAGTCCATACTATGACTTCTCTTGCTGGTTTTGAAGCACTTTTACG TGGCAAAGTTGTCCACTGCTATGGTCTGCCGTTTTATTCAAATTGGGGATTGACTATAGATCAGTTACAATTGCCAAGAC GAAGCCGATTACTTACGCTAACAGAATTATTAGCGGCGGTATTAATTTATTATCCGTTGTATGTTTCGCCCGCAAATGGG CAGTTTATCAATGCAGAAATGGCGATAGCGATCCTAAAACAGCAGAAGGCCAAGCAAGAGAGCGATGGTTTGAATCGTTC TTGGTTGGCAAAGCAGTGGGGAAAAGTTATCCATCTATGTCGAGCATTATTTTAA Protein sequence : MRGLIFSSGILNIPHLAAFLPESELLPYARFRHQAVECVYGWGLKPTSLKARNYATQHNLPYIALEDGFLRSTGLGVEGY PPFSMVVDDLGIYYDTRQPSRLEQLILAADQSAELLQQASLALAQIRQFRLSKYNHAPDFAQSVSAERPIVLVLDQTFGD MAVQCGQADAACFEQMLHAAIAENPHAEIWVKTHPDVISGKKKGYLTQIAKGENVRLLAQDCNPLSLLAQAEKVYCVTSQ MGFEALMLGKTVVTFGVPWFAGWGISDDRHPNVTALQTNGRRAERTFLQLFAAAYLQYSRYIDPNRGTSGSIFDVIDYLH RARQFGERVRGTLYCVGMSLWKRAVIKPFFRFPQCRVIFTSLAHLQKNVKKQPLAKDAKLLIWSNGKPEVLAFAQQYQLP ILRMEDGFIRSVGLGSNLVAPLSLVTDDLGIYFNAQMPSRLEYILQNQQFSKSDLARASALRQQLIQANIGKYNVGSDGF SLNAQGKRTLLVPGQVEDDASIRSGSPVIKRNLDLLKAVRAQNPDAYILYKPHPDVVSGNRIGKIDAQVALQYANEIVEN ANILDCIMQVDEVHTMTSLAGFEALLRGKVVHCYGLPFYSNWGLTIDQLQLPRRSRLLTLTELLAAVLIYYPLYVSPANG QFINAEMAIAILKQQKAKQESDGLNRSWLAKQWGKVIHLCRALF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lipA | NP_273145.1 | capsule polysaccharide modification protein | Not tested | IHT-A | Protein | 0.0 | 59 |
| kpsC | YP_854335.1 | capsule polysaccharide export protein KpsC | Not tested | PAI I APEC-O1 | Protein | 3e-128 | 48 |
| kpsC | AAZ04470.1 | capsule polysaccharide export protein | Virulence | PAI I APEC-O1 | Protein | 2e-128 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| WQG_2620 | YP_007547337.1 | Capsule polysaccharide modification protein LipA | VFG0704 | Protein | 1e-163 | 59 |
| WQG_2620 | YP_007547337.1 | Capsule polysaccharide modification protein LipA | VFG0692 | Protein | 0.0 | 59 |
| WQG_2620 | YP_007547337.1 | Capsule polysaccharide modification protein LipA | VFG0259 | Protein | 0.0 | 59 |
