Gene Information

Name : WQG_21280 (WQG_21280)
Accession : YP_007549196.1
Strain : Bibersteinia trehalosi USDA-ARS-USMARC-192
Genome accession: NC_020515
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2273156 - 2273656 bp
Length : 501 bp
Strand : +
Note : lipid hydroperoxide peroxidase PRK00522; Probable thiol peroxidase of Bacteria UniRef RepID=TPX_PASMU

DNA sequence : 
ATGACAACAATTACTCTCGCAGGCACACCTATTGAAATTGCAGGCACTTTCCCTACCAAAGATAGCCAACTGGCTGATTT
CACCTTAGTCGCAAACGATTTAAGCGATGTCTCACTAGCCAATTTTGCTGGCAAACGTAAGGTACTAAACATTTTCCCAA
GCATTGATACTGGTATTTGCGCAACTTCTGTGCGCGTATTCAACCAGCAAGCGGCTAATTTGAATAATACGGTGGTACTC
TGCATTTCTGCCGATTTACCTTTTGCACAAGCTCGTTTTTGTGGCGCAGAAGGCATAGAAAACGCTAAAACGTTGTCCTG
TTTCCGAGCAAATACCTTCGCAAAAAACCTTGGTGTAGCAATAGTGACAGGCCCATTAGCAGGTTTAACCGCACGTTCTG
TGATTGTATTAGATGAAAATAACAAAGTATTACACAGCGAGCTTGTACCTGAAATTAAGCAAGAACCAAATTACGCAGCA
GCGTTAGCCGCTCTTGCTTGA

Protein sequence : 
MTTITLAGTPIEIAGTFPTKDSQLADFTLVANDLSDVSLANFAGKRKVLNIFPSIDTGICATSVRVFNQQAANLNNTVVL
CISADLPFAQARFCGAEGIENAKTLSCFRANTFAKNLGVAIVTGPLAGLTARSVIVLDENNKVLHSELVPEIKQEPNYAA
ALAALA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 1e-33 47
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 8e-34 47
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-33 46
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 2e-33 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
WQG_21280 YP_007549196.1 thiol peroxidase VFG0087 Protein 3e-34 47