Gene Information

Name : WQG_18420 (WQG_18420)
Accession : YP_007548910.1
Strain : Bibersteinia trehalosi USDA-ARS-USMARC-192
Genome accession: NC_020515
Putative virulence/resistance : Unknown
Product : Riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1994354 - 1995442 bp
Length : 1089 bp
Strand : +
Note : bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase PRK10786; Riboflavin biosynthesis protein RibD of Bacteria UniRef RepID=RIBD_ACTPL

DNA sequence :
ATGAACGATTTTGATTATATGCGTCGTGCGATCACGCTTGCAGAAAAAGCACGTGGTTGGACAAATCCGAATCCGCTTGT
CGGCTGTGTGATTGTCAAAAATGGTGAAATTATTGCCGAAGGTTATCACGAACGCTGTGGCGGTTGGCACGCTGAACGCA
ATGCGATTTTAAAAGCCCAAGCAGATCTGAGCGGTGCGACGGCCTACGTTACCCTTGAACCTTGTTGTCATCACGGTAAA
ACGCCACCTTGCTCCGATTTGTTGATTGAGCGAGGTATCAAAAAAGTGGTGATTGGCTCACGAGATCCCAATCCGCTGGT
CTCAGGCAAAGGTGCTAAACAACTTCGCCAAGCAGGGATGGAAGTCGTGGAAGATTTTTTGAAAGAAGAATGCGATGCGT
TAAACCCGATTTTTTTTCACTATATTCAAACTAAACGCCCTTATGTCTTGCTCAAATACGCAATGACCGCAGATGGTAAA
ATCGCCACTAGCGGTGGACAATCCAAATGGATTACTGGCGAACAAGCAAGAAAAAATGTGCAACGCACTCGCCACGAATA
CAGTGCGATTATGGTTGGGGTGGAAACTGTATTGGCAGACGATCCTATGCTCAATAGCCGAATGGAAAATGCCAAACAAC
CTGTGCGGATTGTGTGTGATAGTCAGTTACGCACGCCACTGGAAAGCCAGTTAGTCCAAACCGCTAAACAGTATCGCACC
ATTATCGCCACCCTTTGCGATGATGCAAAAAAATGCGAAAAATATACCGCTTGTGGTGTAGAAATTTTACGCACAAAAGC
AAAAAACAAGCGGGTAGATTTGAGCGATCTTTTGCAAAAATTAGGCGAAATGGGCATAGATAGCCTCTTGATTGAAGGCG
GTTCACAACTGAATTTCAGTGTATTAGCACAAGGTTTGGTAAATCGTGTGCATTGCTACATTGCGCCTAAATTAGTTGGC
GGTGTGAATGCGAAAACGCCAATCGGTGGGGCGGGTATTGCAGAAATTGCCCATGCAGTGAAATTAACAAATCCGAAAAT
TTCACAAATTGGCGAAGATATTTTAATCGATTACGAGATCAAACAGTAG

Protein sequence :
MNDFDYMRRAITLAEKARGWTNPNPLVGCVIVKNGEIIAEGYHERCGGWHAERNAILKAQADLSGATAYVTLEPCCHHGK
TPPCSDLLIERGIKKVVIGSRDPNPLVSGKGAKQLRQAGMEVVEDFLKEECDALNPIFFHYIQTKRPYVLLKYAMTADGK
IATSGGQSKWITGEQARKNVQRTRHEYSAIMVGVETVLADDPMLNSRMENAKQPVRIVCDSQLRTPLESQLVQTAKQYRT
IIATLCDDAKKCEKYTACGVEILRTKAKNKRVDLSDLLQKLGEMGIDSLLIEGGSQLNFSVLAQGLVNRVHCYIAPKLVG
GVNAKTPIGGAGIAEIAHAVKLTNPKISQIGEDILIDYEIKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 1e-39 41
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 1e-39 41