Gene Information

Name : WQG_16280 (WQG_16280)
Accession : YP_007548696.1
Strain : Bibersteinia trehalosi USDA-ARS-USMARC-192
Genome accession: NC_020515
Putative virulence/resistance : Virulence
Product : Leukotoxin-activating lysine-acyltransferase lktC serotype A1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1792251 - 1792670 bp
Length : 420 bp
Strand : -
Note : Leukotoxin-activating lysine-acyltransferase lktC serotype A1 of Pasteurellaceae UniRef RepID=LKTC1_PASHA

DNA sequence :
TTGTTAGCTTGTAATGTTATTCCAGCAATTGAAAATGAACAATATATGCTGCTTGTCGATAATGGGATACCTATTGCTTA
TTGTAGCTGGGCAGACTTAAATCTGGAGACAGAGGTAAAATATATTAAGGATATTAGTTCGTTAACATCCGATGAATGGC
AATCGGGTGATCGACGCTGGATTATTGACTGGGTAGCGCCATTTGGACATTCTCAATTACTTTATAAAAAAATGTGTCAG
AAATACCCAGATATGATCGTCAGAGCTATACGGTTTTATCCAAAACAGAAAGAACTAGGTAAAATTACTTATTTTAAAGG
AGGTAAATTAGACAAAAAAACAGCAAAAGAACGTTTTGATATATATCAAGAAGAACTGGCAACAGCGTTGAAAAATGAAT
TTAATTTTATCGAAAAATAA

Protein sequence :
MLACNVIPAIENEQYMLLVDNGIPIAYCSWADLNLETEVKYIKDISSLTSDEWQSGDRRWIIDWVAPFGHSQLLYKKMCQ
KYPDMIVRAIRFYPKQKELGKITYFKGGKLDKKTAKERFDIYQEELATALKNEFNFIEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyC CAD42040.1 HlyC protein Virulence PAI II 536 Protein 6e-32 52
hlyC CAD33758.1 hemolysin C Virulence PAI I 536 Protein 7e-32 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
WQG_16280 YP_007548696.1 Leukotoxin-activating lysine-acyltransferase lktC serotype A1 VFG1559 Protein 3e-32 52
WQG_16280 YP_007548696.1 Leukotoxin-activating lysine-acyltransferase lktC serotype A1 VFG0842 Protein 9e-30 52
WQG_16280 YP_007548696.1 Leukotoxin-activating lysine-acyltransferase lktC serotype A1 VFG1499 Protein 3e-32 52