Gene Information

Name : WQG_15300 (WQG_15300)
Accession : YP_007548598.1
Strain : Bibersteinia trehalosi USDA-ARS-USMARC-192
Genome accession: NC_020515
Putative virulence/resistance : Virulence
Product : iron transport system membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1693732 - 1694625 bp
Length : 894 bp
Strand : -
Note : Probable iron transport system membrane protein HI_0360 of Bacteria UniRef RepID=Y360_HAEIN

DNA sequence : 
ATGCTTGAGGTATTACTTGAGCCTTTCAGCTACGACTATATGTTTAAAGCCATTTGGGTGAGTGGGTTGATTGGCGGAGT
ATGTGCTTTTATGTCGGCATACTTAATGTTAAAAGGCTGGTCATTAATTGGTGATGCGTTATCTCATGCGGTAGTTCCAG
GGGTTGCAATTGCTTATGCATTTTCTCTGCCTTATGCGCTCGGTGCATTTTTTTCTGGTTTTCTTGCCACGTTAGCTATT
TTAGCGGTGAAATCATTGAGCAAATTACGTGAGGATGCAGTAATCGGCTTTATTTTCAGTACTTTTTTTGCAATTGGATT
ACTGATTGTCTCGATCAATCCAACCAGTGTTAATGTGCAATCTATTGTTCTGGGGAATATCCTTGGTATAGCAGATGAAG
ATATTGTGCAACTCTATTGGATTTTGGGAATTTCAACACTATTACTTGTGCTGTTTTGGAAAGATCTATTGCTGGTATTT
TTTGATGAAACACAAGCGCGAGCGGTTGGATTATCCCCCTTACGTTATAAAATTTTATTTTTTAGCTTGTTAAGTGCATG
CGTTGTAAGTGCACTGCAAAGTGTCGGTGCAATTTTGGTGATTGCGATGGTGGTGACCCCTGGTGCAACCGCATACTTGC
TGACAGATCGTTTTGGCTATTTAGTGCTTATTGCAATTATCATTGGGAGTGTAACAAGTGCGATGGGGGCTTATTTAAGC
TACTTTGCAGATGGTACAACAGGTGGATTTATTGTATCGATACAAACTGGCATTTTTCTATTAGCTTTTCTGTTTGCGCC
TAAATATGGTTTCATTCCGCGCCGTTTTGCAAAAAAACAGCCAAATGTGAGCGCTTGTAAAGCCGAAAAAACAGGAGAGA
AAGCTTATGGTTGA

Protein sequence : 
MLEVLLEPFSYDYMFKAIWVSGLIGGVCAFMSAYLMLKGWSLIGDALSHAVVPGVAIAYAFSLPYALGAFFSGFLATLAI
LAVKSLSKLREDAVIGFIFSTFFAIGLLIVSINPTSVNVQSIVLGNILGIADEDIVQLYWILGISTLLLVLFWKDLLLVF
FDETQARAVGLSPLRYKILFFSLLSACVVSALQSVGAILVIAMVVTPGATAYLLTDRFGYLVLIAIIIGSVTSAMGAYLS
YFADGTTGGFIVSIQTGIFLLAFLFAPKYGFIPRRFAKKQPNVSACKAEKTGEKAYG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-67 59
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-67 59
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-67 59
sitC NP_461784.1 permease Virulence SPI-1 Protein 2e-67 59
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 1e-67 59

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
WQG_15300 YP_007548598.1 iron transport system membrane protein BAC0441 Protein 3e-77 69
WQG_15300 YP_007548598.1 iron transport system membrane protein BAC0351 Protein 9e-68 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
WQG_15300 YP_007548598.1 iron transport system membrane protein VFG0527 Protein 8e-68 59