Gene Information

Name : WQG_15290 (WQG_15290)
Accession : YP_007548597.1
Strain : Bibersteinia trehalosi USDA-ARS-USMARC-192
Genome accession: NC_020515
Putative virulence/resistance : Virulence
Product : Chelated iron transport system membrane protein yfeD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1692918 - 1693739 bp
Length : 822 bp
Strand : -
Note : Chelated iron transport system membrane protein yfeD of Proteobacteria UniRef RepID=D3V1I7_XENBS

DNA sequence : 
ATGGTTGAATGGTTGAGCGAGCCTTTTGTTTTCCCTTTTATGCAACGAGCACTCATTATTGGGATTTTGGTAAGCTCGGT
GTGCGCTGTGCTTTCTTGCTATTTAGTCTTAAAAGGCTGGGCATTAATGGGTGATGCAATTTCACATGCTGTGCTTCCTG
GGATTGTTATTGCGCATTTGTTATCTTTGCCACTTGCTTTAGGTGCTTTTTCTGCTGGTATTTTTAGTGCGGTAGCAATT
GGTTACTTAAAACAGCATAGCCGCATTAAGCAGGATACCGTCATGGGCATTGTGTTTTCGGGTATGTTTGCCTTTGGTTT
AGTGATGTTTGCAAAATTGGATACGAACCAGCACCTATTGCATATTTTATTTGGGGATATTCTTGGTATTCATGACCACG
ACTTTTGGCTAAGTTTAGGGATTGCCACTCTTGTCTTGCTGATTATTTTGGTTAAGCGCCGTGACTTTTTGCTTTACTGC
TTTGACCCAAGTCATGCAAGGGTTGCTGGGTTAAATAGTCAGCTATTGCATTATGGTTTGTTAGTACTACTGACCGCAAT
GATCGTGAGTGCAATGCAAGTTGTTGGTGTTATTCTTGTGGTCGCGATGTTAATTACCCCAGGGATGACAGGATTTGTTC
TCAATAAGCGCTTTGATAAAATGCTTCTGACGGCCGTTTGTTCTGCGGTATTAAGTGCTTATTTAGGCATTTTGCTGAGT
TTCCACTGGAACGTTGCAACTGGGGCAATGATTGTGGTGCTACAAGCAATCTGCTTTGTGCTTGCACTACTGTATAGCCG
GCTTAAGGCAATTTTGCATTAA

Protein sequence : 
MVEWLSEPFVFPFMQRALIIGILVSSVCAVLSCYLVLKGWALMGDAISHAVLPGIVIAHLLSLPLALGAFSAGIFSAVAI
GYLKQHSRIKQDTVMGIVFSGMFAFGLVMFAKLDTNQHLLHILFGDILGIHDHDFWLSLGIATLVLLIILVKRRDFLLYC
FDPSHARVAGLNSQLLHYGLLVLLTAMIVSAMQVVGVILVVAMLITPGMTGFVLNKRFDKMLLTAVCSAVLSAYLGILLS
FHWNVATGAMIVVLQAICFVLALLYSRLKAILH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 2e-58 51
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 4e-58 51
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 4e-58 51
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-58 51
sitD NP_461785.1 permease Virulence SPI-1 Protein 2e-58 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
WQG_15290 YP_007548597.1 Chelated iron transport system membrane protein yfeD BAC0442 Protein 1e-77 61
WQG_15290 YP_007548597.1 Chelated iron transport system membrane protein yfeD BAC0352 Protein 9e-59 51
WQG_15290 YP_007548597.1 Chelated iron transport system membrane protein yfeD BAC0441 Protein 2e-40 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
WQG_15290 YP_007548597.1 Chelated iron transport system membrane protein yfeD VFG0528 Protein 9e-59 51