Gene Information

Name : WQG_10380 (WQG_10380)
Accession : YP_007548106.1
Strain : Bibersteinia trehalosi USDA-ARS-USMARC-192
Genome accession: NC_020515
Putative virulence/resistance : Virulence
Product : Single-stranded DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1118880 - 1119398 bp
Length : 519 bp
Strand : +
Note : single-stranded DNA-binding protein PRK06863; Single-stranded DNA-binding protein of root UniRef RepID=SSB_HAEDU

DNA sequence : 
ATGGCAGGTGTAAATAAAGTCATCATTGTTGGCAATTTAGGTAATGATCCTGAAATGCGCACAATGCCAAATGGCGAAGC
AGTGGCGAATATTAGTGTAGCAACATCAGAAAGTTGGACAGATAAAAATACAGGCGAACGTCGTGAAATCACAGAATGGC
ATCGTATCGTGTTTTATCGTCGTCAAGCAGAAATTTGCGGGCAATATCTGCGTAAAGGTTCAAAAGTCTATGTAGAAGGG
CGTTTAAGAACCCGTAAATGGCAGGATCAAAATGGTCAAGACCGCTATACCACAGAAATCCAAGGCGATGTGATGCAGAT
GCTGGATAGTCGTAATAGTCAAGGTGGGGATTTTGGTGGCAGCCAGGGCGGTTGGAATCAAGCCCCAGCTCAGACGAATT
ATAACCAAGGCGGCTATAATGGCGATTATGCACAAACAGCACCACAACGCCAAACAGCAAAACCTGCGCCACAAGCAGAG
CCTGCAATGAATAATTTTGATGATGATATTCCATTCTAA

Protein sequence : 
MAGVNKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNTGERREITEWHRIVFYRRQAEICGQYLRKGSKVYVEG
RLRTRKWQDQNGQDRYTTEIQGDVMQMLDSRNSQGGDFGGSQGGWNQAPAQTNYNQGGYNGDYAQTAPQRQTAKPAPQAE
PAMNNFDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 4e-49 68
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 6e-35 54
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 9e-35 54
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 9e-35 54
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 1e-28 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
WQG_10380 YP_007548106.1 Single-stranded DNA-binding protein VFG0576 Protein 4e-35 56