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Name : C427_5483 (C427_5483) Accession : YP_007546928.1 Strain : Glaciecola psychrophila 170 Genome accession: NC_020514 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 5264968 - 5266530 bp Length : 1563 bp Strand : - Note : - DNA sequence : ATGCCAGCCGCCCACCTAAGCGCTGTGGATGCAGAAGAACAGGCATTGCTAGAGTCAGGCACCGATCTGGATATGCCTGT TGACGAGCCCGAGCACAAACAATTGGCTTTTAGCTTCGCTAAGCGTCATCAAGTATTACTTGATACAGGCGAAAATCCCG CCATTCTGTATCATACCCAAGATACCGAATTTCAGATATTTGCAGAAGTCAGACGATTTTTAGGCGCAGAATTTCGCCTT AAGGAAGTCGAGCTTGATAAGTTTGAGACCATCTTAACCAGAGCCTTCCAACGAGACTCATCAGCAGCTAAACAATTAAT GGAAGACATAGGCAATGAAAGTGATTTGTTTAGTCTGGCGGAAGATTTACCCAACACCGAAGATTTGTTAGAAAGCGAAG ATGACGCACCCATTATCAAACTCATTAACGCCATGCTGGGTGAAGCGATCAAGGAAGGCGCATCAGATATTCATATCGAA ACCTTCGAAACCCAGCTTTTAGTGCGCTTTAGAGTCGATGGGGTATTACGAGAAATTTTACGTCCCAATCGTAAAATGGC TTCAATGTTAGTATCTCGCATCAAAGTAATGTCAAAAATGGACATAGCCGAAAAACGGGTTCCACAAGATGGCCGTATTA CTTTACGTATTGCGGGTCGTGCGGTTGACGTGCGAGTCTCCACTATGCCGTCGAGTCACGGTGAGCGCGTGGTATTACGT TTACTCGATAAAAACAACGTACGCCTAAACTTGCAAGACTTAGGCATGACAAAAACCAATCGTGGTGTCTTTTCTAAATT GGTACGTAAACCTCACGGCATTATCTTGGTCACAGGTCCGACAGGCTCAGGTAAATCGACTACCTTGTATGCTGGCTTAA GTGAAATTAATTCCAAAGATCGGAATATTTTAACGGTTGAAGACCCTATAGAATTTGATTTGCAAGGCATTGGTCAAACG CAAGTTAACCCAAAGGTCGATATGACCTTTGCCCGTGGTCTAAGAGCGATATTGCGACAAGATCCTGATGTCGTCATGGT AGGTGAAATTCGCGATTTAGAAACAGCACAAATCAGTGTGCAAGCCAGTTTGACCGGTCACTTAGTGATGTCGACTTTAC ACACCAATACTGCAGCAGGTGCCATCACGCGTTTAGAAGATATGGGTATCGAACCTTTCTTATTATCCTCTAGCTTATTG GCAGTATTGTCGCAACGCCTAGTGCGTACTTTATGCTCAGACTGTAAAATTTCACATATCCCCAGTGAGCAAGAATGCAT AATTTTAGGTATAAAAACAGCTGCTGCCTCTAGCCATGCCGTTCATATACCTAAAGGATGCGCAGCTTGTAATCAAACGG GCTACAGAGGCAGAACAGGTATTCACGAATTATTAGTCGTCGATGAAGGTATACGAGAACTTATTCATACTGGCCACGGT GAGCAAGCAATTGAAAAATATATTCGCCAAAACACGCCGAGTATTCGAGACGATGGCTGTGACAAGGTATTGTTAGGCAT TACCTCGCTTGAAGAAGTGTTGCGAGTGACAAAGGAAGATTAA Protein sequence : MPAAHLSAVDAEEQALLESGTDLDMPVDEPEHKQLAFSFAKRHQVLLDTGENPAILYHTQDTEFQIFAEVRRFLGAEFRL KEVELDKFETILTRAFQRDSSAAKQLMEDIGNESDLFSLAEDLPNTEDLLESEDDAPIIKLINAMLGEAIKEGASDIHIE TFETQLLVRFRVDGVLREILRPNRKMASMLVSRIKVMSKMDIAEKRVPQDGRITLRIAGRAVDVRVSTMPSSHGERVVLR LLDKNNVRLNLQDLGMTKTNRGVFSKLVRKPHGIILVTGPTGSGKSTTLYAGLSEINSKDRNILTVEDPIEFDLQGIGQT QVNPKVDMTFARGLRAILRQDPDVVMVGEIRDLETAQISVQASLTGHLVMSTLHTNTAAGAITRLEDMGIEPFLLSSSLL AVLSQRLVRTLCSDCKISHIPSEQECIILGIKTAAASSHAVHIPKGCAACNQTGYRGRTGIHELLVVDEGIRELIHTGHG EQAIEKYIRQNTPSIRDDGCDKVLLGITSLEEVLRVTKED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 7e-146 | 64 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-146 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| C427_5483 | YP_007546928.1 | general secretory pathway protein E | VFG0182 | Protein | 6e-143 | 64 |
| C427_5483 | YP_007546928.1 | general secretory pathway protein E | VFG2048 | Protein | 6e-146 | 63 |
| C427_5483 | YP_007546928.1 | general secretory pathway protein E | VFG1876 | Protein | 1e-131 | 58 |
| C427_5483 | YP_007546928.1 | general secretory pathway protein E | VFG2426 | Protein | 7e-69 | 46 |
| C427_5483 | YP_007546928.1 | general secretory pathway protein E | VFG0112 | Protein | 1e-80 | 45 |
| C427_5483 | YP_007546928.1 | general secretory pathway protein E | VFG1880 | Protein | 2e-80 | 44 |
