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Name : C427_5482 (C427_5482) Accession : YP_007546927.1 Strain : Glaciecola psychrophila 170 Genome accession: NC_020514 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : - COG ID : - EC number : - Position : 5263747 - 5264967 bp Length : 1221 bp Strand : - Note : - DNA sequence : ATGGCTGCTTATTCATATCAAGCCATGGACAAAGGTGGCAAAAATAAAAATGGTGTTCTAGAGGGCGATAACCCAAGGCA AATACGTCAGCAATTGCGAGAAAAAGGCTTAATACCCATGCAAGTTGACCAAGTGGCCGAAAAAGAACGCAAGTCGCAAG CTGGCTTTATTTTATTTAAAAATACTATTTCGGCTTCCGATTTATCGCTACTCACCCGTCAACTATCCACCTTGGTTGAA GCTTCCTTACCTATCGAAGAATCATTGTTGGCTGTTGCTGAGCAATGTGAAAAACCACGTCAAAAAAACATGATGATGGC GGTACGTAGCAAGGTAGTAGAAGGTCATACTTTAGCTGACGCTATGGCGGAATTCCCCCACGTATTTGATGATTTATTTC GAGCTATGGTAGCCGCTGGTGAAAAATCAGGACACCTTGACACGGTACTTAACCGTTTGGCTGATTATACCGAAAAGCGC CAGCAAACTAAGAGCCAAATTACTCAAGCTATGGTTTACCCAAGCATCATGATGTTTTTTGCTTTTGCCATAGTAATATT ATTATTGACCGTGGTAGTACCCAAAATTGTGGGGCAGTTTCAGAATATGGGTCAGGACTTACCGACTATCACTCAGATAT TGATTGATGTCAGTGAGTTTTTGCAGGCTTATGGATTAGCACTAGCCATTGTGTTGGTGGTGCTTATAGTCATTGTGAAT CGCGTATTGCAGAAGCCTGTCATGAAAAAACGTTATCACAAACTTATTCTGGGCTTACCTTTTATTGGTAAATTATCTAA AGGCTTAAATACCGCACGATTTGCTCGTACCTTAAGCATTTTGACTTCCAGCGCAGTGCCACTACTAGAAAGTATGCGTA TTGCTAGTGAAGTACTGGAGAACTTACAGATAAGAGATGCGGTCAACACTGCTGCAGGTTTTGTAAAAGAAGGTTCGAGC TTGCGAGCCTCACTAGAACAAACCAAAATGTTTCCACCTATGATGATGCATATGATCGCATCAGGTGAACGCAGTGGTGA ATTACAACAAATGTTAGGACGTGCAGCAGATAATCAAGACAGGCAATTTGAATCTTTGGTGGGTGTATCACTCAAAATAT TCGAACCTATTTTAATCGTGACGATGGCAACAGTAGTACTGTTTATTGTGCTGGCAATCTTACAACCTATTATGGCATTA AACTCTATGGTGAATATCTAA Protein sequence : MAAYSYQAMDKGGKNKNGVLEGDNPRQIRQQLREKGLIPMQVDQVAEKERKSQAGFILFKNTISASDLSLLTRQLSTLVE ASLPIEESLLAVAEQCEKPRQKNMMMAVRSKVVEGHTLADAMAEFPHVFDDLFRAMVAAGEKSGHLDTVLNRLADYTEKR QQTKSQITQAMVYPSIMMFFAFAIVILLLTVVVPKIVGQFQNMGQDLPTITQILIDVSEFLQAYGLALAIVLVVLIVIVN RVLQKPVMKKRYHKLILGLPFIGKLSKGLNTARFARTLSILTSSAVPLLESMRIASEVLENLQIRDAVNTAAGFVKEGSS LRASLEQTKMFPPMMMHMIASGERSGELQQMLGRAADNQDRQFESLVGVSLKIFEPILIVTMATVVLFIVLAILQPIMAL NSMVNI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 7e-93 | 50 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-91 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| C427_5482 | YP_007546927.1 | general secretion pathway protein F | VFG2049 | Protein | 3e-90 | 50 |
| C427_5482 | YP_007546927.1 | general secretion pathway protein F | VFG0181 | Protein | 2e-94 | 49 |
| C427_5482 | YP_007546927.1 | general secretion pathway protein F | VFG1870 | Protein | 7e-84 | 44 |
