Gene Information

Name : C427_5394 (C427_5394)
Accession : YP_007546839.1
Strain : Glaciecola psychrophila 170
Genome accession: NC_020514
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5184712 - 5185401 bp
Length : 690 bp
Strand : -
Note : -

DNA sequence :
GTGTCTGGGTGGCTTAGGGAGGACCAGAGCATCGACATTAGTTATGAAACTATTTATCAGCACATTTGGTCTGACAAAAA
AAATGGTGGTTATTTATTCCAACATTTACGTAGGAAAGGTAAAGCTTATCAATCACGTAGTAAGGATAAACAAGCTGGCA
GAGGGTTTATTAAGAACCGTATAAGTATCGATGAGCGTCCACACGTTGTTGATGATAAAAGTAGAATGGGTGATTGGGAA
ATTGACCTCGTTATTGGCAAAGGTCACAGTGGCGCACTGGTCACGATTGTAGAGCGCAAAACGAGTTTTACCGTTTCGAG
ACGTGTAGATGACAAGTCAGAAAAAACATTCACAGCAGCCACCATCGCCTTGTTAGCGCCGTTTAAAAGCGCTGTACTCA
CGATTACAGCGGATAATGGTAAAGAGTTTGCGTACCATGAACAGATGACTGAAAGATTGAAATGTGATGTGTATTTTGCA
GACCCTTATTGTTCGTGGCAACGAGGCTTGAATGAAAATACCAATGGTCTATTACGACAATATTGGCCGAAATCAACAGA
CTTTAAAAAGGTATCGCAATCAGCCGTTCAAGATGTAATAGTCAATCTCAATAACAGACCAAGAAAGAAACTAAATTATA
AAACGCCAGCCAAATTGATGGCTGAACACATGGTGGCTATAGCTGCTTAG

Protein sequence :
MSGWLREDQSIDISYETIYQHIWSDKKNGGYLFQHLRRKGKAYQSRSKDKQAGRGFIKNRISIDERPHVVDDKSRMGDWE
IDLVIGKGHSGALVTIVERKTSFTVSRRVDDKSEKTFTAATIALLAPFKSAVLTITADNGKEFAYHEQMTERLKCDVYFA
DPYCSWQRGLNENTNGLLRQYWPKSTDFKKVSQSAVQDVIVNLNNRPRKKLNYKTPAKLMAEHMVAIAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VSAL_I1466 YP_002262909.1 transposase Not tested Not named Protein 5e-35 42