|
Name : C427_5288 (C427_5288) Accession : YP_007546733.1 Strain : Glaciecola psychrophila 170 Genome accession: NC_020514 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : - COG ID : - EC number : - Position : 5085110 - 5087074 bp Length : 1965 bp Strand : - Note : - DNA sequence : ATGTCAAAACGTCGTCAAACCCGTGCTAATGCACAACAATTTATTGATAACCTTAAACCACTATTACACCCTAATTCCCG CAAAGTATACTTAGCGGGAAGCCATCACAATATCCAAGTGGGTATGCGGGCTATTTCCCAAACTGACACCATCTTGGGTG GTACTGAAGACAATCCTGTCATCGAAACTAACCCGGATATTATGGTGTATGACTGTGCCGGTCCTTATTCAGATCCTGAA GCTAATATCGACGTTCGCAAAGGATTAGCCAAACTTCGTCACAATTGGATCATGCAGCGGGGAGATGTTGAACAATTACC TCATGTCAGTTCGGGTTATACCCAAGAGCGTATGACTGATGATGGTTTAGAACATTTACGTTTTGACTCTATTGATAAAC CACTTAAAGCCAAAGTAGGGCAATGTGTTACCCAAATGCACTATGCCAGAGCGGGCATTATTACCCCTGAAATGGAATAT ATCGCGATCCGCGAAAATATGGCTCGTGAGGAAGTAACTGACGATGTTTTAACCCAAAAAGCACCCGGCAATGCCTTTGG CGCTTTGATGGGGCAGCCGATTACTGCTGAGTTTGTGCGTGATGAAGTAGCTCGTGGCCGAGCTATCATCCCGGTTAATA TTAATCACCCAGAAGCTGAACCCATGATCATTGGTCGTAATTTTTTGGTTAAAGTAAACGCTAATATAGGTAACTCTGCG GTGACTTCTTCCATTGAAGAAGAGGTAGAAAAACTAGTTTGGTCAACTCGTTGGGGTGCTGATACGGTAATGGATTTATC CACTGGGCGTTATATTCACGAAACTCGCGAGTGGATCGTACGTAACTCCCCTGTGCCTATTGGCACCGTGCCGATTTATC AAGCGTTAGAAAAAGTCAATGGCGTGGCAGAAGACTTAACCTGGGAGGTGTTTCGGGATACTTTGATTGAACAAGCTGAA CAAGGAGTGGATTATTTTACTATTCACGCAGGTGTATTATTGCGTTATGTGCCAATGACAGCCAAACGCTTAACCGGCAT TGTATCCCGAGGTGGTTCTATTATGGCCAAGTGGTGCCTGTTTCATCATAAAGAAAGCTTTTTGTACCAGCATTTCAGAG ACATTTGCGAGTTATGTGCCGCTTATGATGTGTCTCTGTCGTTAGGCGATGGAATGCGTCCGGGTTGTATTGCTGACGCC AATGACGAAGCACAGTTTGCTGAGCTTGATACCTTAGGTGAACTAGTCAAAATTGCGTGGCAATATGATGTGCAGACCAT TGTTGAAGGTCCCGGCCATATTCCTATGCAATTGATTAAAGAGAACATAGACAAGCAGCTTGAAATTTGTAGTGAAGCTC CCTTTTATACGTTAGGCCCACAAACGACTGATATTGCCCCAGGTTATGATCATTTTACTTCTGGTATAGGCGCAGCCATG ATCGGCTGGTATGGCGTAGCGATGTTGTGTTATGTCACGCCTAAAGAACATTTGGGTTTGCCAAATAAAGAAGATGTTAA GCAGGGCTTGATTGCCTACAAGATAGCGGCTCATGCTGCAGATGTTGCAAAGGGGCATCCTGGTGCACAAATTCGCGACA ATGCTTTGTCCAAATCACGTTTTGAATTTAGGTGGGAAGATCAATATAACTTGGGTTTAGATCCAGAAACTGCACGCGCT TATCATGACGAAAGCCTACCGCAAGAGTCAGCTAAAGTGGCACACTTTTGTTCTATGTGTGGGCCCAAGTTCTGCTCTAT GAAAATCACTCACGAAGTGCGTGAATACGTTGCTAAACAAAAAATTAAAGTTGAACAGGATGCATCAAGACTGGCTGCTA GTCGCACAGGTCTCAGCTCAGCAGAAATACAATCCGCTATGGCAGAAAAATCAAAGGAATTTAAAGCACAAGGGGCGCAA ATTTATACACCTCTTGGAGAAGTACCCACGACCGAGCCTGAATAA Protein sequence : MSKRRQTRANAQQFIDNLKPLLHPNSRKVYLAGSHHNIQVGMRAISQTDTILGGTEDNPVIETNPDIMVYDCAGPYSDPE ANIDVRKGLAKLRHNWIMQRGDVEQLPHVSSGYTQERMTDDGLEHLRFDSIDKPLKAKVGQCVTQMHYARAGIITPEMEY IAIRENMAREEVTDDVLTQKAPGNAFGALMGQPITAEFVRDEVARGRAIIPVNINHPEAEPMIIGRNFLVKVNANIGNSA VTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWIVRNSPVPIGTVPIYQALEKVNGVAEDLTWEVFRDTLIEQAE QGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCLFHHKESFLYQHFRDICELCAAYDVSLSLGDGMRPGCIADA NDEAQFAELDTLGELVKIAWQYDVQTIVEGPGHIPMQLIKENIDKQLEICSEAPFYTLGPQTTDIAPGYDHFTSGIGAAM IGWYGVAMLCYVTPKEHLGLPNKEDVKQGLIAYKIAAHAADVAKGHPGAQIRDNALSKSRFEFRWEDQYNLGLDPETARA YHDESLPQESAKVAHFCSMCGPKFCSMKITHEVREYVAKQKIKVEQDASRLAASRTGLSSAEIQSAMAEKSKEFKAQGAQ IYTPLGEVPTTEPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 66 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 66 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 66 |
