Gene Information

Name : C427_4959 (C427_4959)
Accession : YP_007546406.1
Strain : Glaciecola psychrophila 170
Genome accession: NC_020514
Putative virulence/resistance : Virulence
Product : redoxin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4786128 - 4786622 bp
Length : 495 bp
Strand : -
Note : -

DNA sequence : 
ATGGCCACAGTGACATTGCAAGGAAACGCGTTTAATACATGCGGTGATTTACCAAAAGTAGGGTCTAAGGCGCCTAACTT
CATTTTAGTAGAAACTGACTTATCGGAAACAACATTAGCAGATTACAAAGGATCAAAACTGATCTTAAATATTTTTCCTT
CAGTGGATACGGGTGTGTGTGCTACCTCAATCCGTACTTTTAATCAAAAGGCCAGTGAATTAAGAAATACTAAAGTGGTA
TGCGTATCAGCTGACCTACCTTTCGCTGCAGCAAGATTCTGTGGAGTAGAGGGCATTAAAAATGTAGTCACAGGCTCAAG
TTTTAGAGGAAGTTTTGGCACTGATTATGGTGTGAGTTTTAGTGATGGTCCTCTGACTGGTTTATTGTCTCGAAGCGTAG
TGGTGATCGATGAACAAGGCAATGTTGTTTACACTGAACAAGTCGCTGAAACTACTGATGAGCCTGATTATGCAGCAGCT
ACAGCTGTTCTATAA

Protein sequence : 
MATVTLQGNAFNTCGDLPKVGSKAPNFILVETDLSETTLADYKGSKLILNIFPSVDTGVCATSIRTFNQKASELRNTKVV
CVSADLPFAAARFCGVEGIKNVVTGSSFRGSFGTDYGVSFSDGPLTGLLSRSVVVIDEQGNVVYTEQVAETTDEPDYAAA
TAVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 3e-30 43
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 2e-30 43
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 2e-30 43
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 1e-30 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C427_4959 YP_007546406.1 redoxin VFG0087 Protein 6e-31 43