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Name : gabD (C427_4058) Accession : YP_007545511.1 Strain : Glaciecola psychrophila 170 Genome accession: NC_020514 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 3898140 - 3899591 bp Length : 1452 bp Strand : + Note : - DNA sequence : GTGAACCTGCAAGACTTATCTATTTTCAAAAATCAATGCCTTATCAACGGACAATGGTCATCGCACTCTGAATTAATAGA TGTACGTAACCCTGCTGATGGCAAAATCCTGACTCAAGTACCCTATATGGATGGTATCGAAACCAGATTGGCAATTAACG CAGCTAACCACGCATTGAGTTCATGGAAATCATTAACCGCTTACAAACGAGCTGAGATACTCATGAAATGGCATGATCTA GTGGTCGCACGAGCCAATGATCTAGCCACAATTATGACGCTTGAACAAGGTAAGCCACTTAATGAAGCAAAAGGAGAAGT ATTATATGCAGCAAGTTATATTAAGTGGTTTGCAGAAGAGGCACGTCGTGCATACGGCGAAATTATACCCAGTGAAGACA ATACCAAAAAGATCCACGTTACCAAAGAGCCCATAGGGGTATGTGCTGCAATCACACCTTGGAATTTCCCTGCCGCAATG ATCACTAGAAAAGTGGCGCCAGCACTGGCTGCTGGCTGTACGATTGTTGTAAAACCAGCCATGGAAACACCATTGACTGC CTTTGCACTGCTAGGCTTAGCACAAGACGCAGGCGTACCAGATGGTGTGATCAACGTATTAACCGGTGACGCTAAAAAGA TTGGTGCCGAAATGACATCTAATCCTATTGTCCGCAAGCTCAGCTTCACAGGCTCTACATCAGTAGGCGCGAAGCTAATG GCAGATTGTGCTCCGTCTATCAAAAAATTATCGCTTGAGCTTGGTGGCAATGCGCCATTCATTGTATTTGATGATGCCAA CTTAGAGCTTGCTGCATCTGAATTAATCAAGAGTAAATTCAGAAATGCTGGCCAAACGTGCGTATGTGCGAACCGTATTT ACATTCAAAAAGGGGTGTATAAACAATTTTCTGAAGTATTTTTAGAGAAAGTCAAACAACTTAAAGTGGGAAATGGGCTT GAAGCTGGCACTAATATCGGCCCACTAATTGACCAAAAAGCAGTACGCAAAGTACGTCAGCACATCGAAGACGCGTTATG CAAAGGCGCATCTATTTTGATTGGCGGTGAACCCCACAGCAATAGCGACAACTGGTTTCCACCCACAGTTTTACTCAATG CAAACCAAACTATGCAATGCGCCAACGAAGAAACGTTTGGTCCACTTGCTCCACTAATTTGCTTCGACACCATTGATGCA GCCATTCAAATGGCAAATAGCACAGAGTTTGGTCTCGCTGCTTATATGTTCTCAGAAAACCACCGTACCATTGAAAAAGT GAGTAGTCGCTTGGAAGTGGGCATGGTCGGGGTTAACACCGGCATCATATCTACTGCCGTTGCGCCTTTTGGAGGCGTTA AATCAAGTGGTATTGGTAGAGAGGGCGCACGTGCCGGATTAGATGAATATTTAGAAATAAAATACGTTTGTTATGGTATG GGATTAAGTTAA Protein sequence : MNLQDLSIFKNQCLINGQWSSHSELIDVRNPADGKILTQVPYMDGIETRLAINAANHALSSWKSLTAYKRAEILMKWHDL VVARANDLATIMTLEQGKPLNEAKGEVLYAASYIKWFAEEARRAYGEIIPSEDNTKKIHVTKEPIGVCAAITPWNFPAAM ITRKVAPALAAGCTIVVKPAMETPLTAFALLGLAQDAGVPDGVINVLTGDAKKIGAEMTSNPIVRKLSFTGSTSVGAKLM ADCAPSIKKLSLELGGNAPFIVFDDANLELAASELIKSKFRNAGQTCVCANRIYIQKGVYKQFSEVFLEKVKQLKVGNGL EAGTNIGPLIDQKAVRKVRQHIEDALCKGASILIGGEPHSNSDNWFPPTVLLNANQTMQCANEETFGPLAPLICFDTIDA AIQMANSTEFGLAAYMFSENHRTIEKVSSRLEVGMVGVNTGIISTAVAPFGGVKSSGIGREGARAGLDEYLEIKYVCYGM GLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 5e-127 | 55 |
