Gene Information

Name : C427_4005 (C427_4005)
Accession : YP_007545458.1
Strain : Glaciecola psychrophila 170
Genome accession: NC_020514
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3852468 - 3853187 bp
Length : 720 bp
Strand : -
Note : -

DNA sequence : 
ATGACTCCAACAACTATGATTAAGACAAACGGTATTAGTAAAACAGTTACTACGACGCAAGGTCAATTACAGATCCTCAA
GCCAATTAGCTTTGAAGTCAAGGCGGGTGAGTCGATTGCAATAGTTGGCGCGTCAGGCTCAGGTAAATCCACTTTGCTTA
GCTTGTTGGCGGGACTCGATGAGGTGAGTGAGGGAGAAATATTTATAGATGGTCAAGCCATGCAAAACATGGATGAGGAA
CAGCGAGCCCAATTAAGAGGGGCTAAAGTGGGCTTTATTTTTCAAAGTTTTATGTTGGTTCAAAGTTTAACGGCATTAGA
AAATATTATGTTACCAGCCGAGATAGCTGGCCACGATGATGCGAAAAAAAGAGCCTTGGACATTCTACAACTGGTGGGGC
TCGATCATAGAGCAAGTCACTATCCAAATCAGTTATCTGGCGGTGAACAACAACGTGTCGCGATAGCGCGAGCGTTTATT
TCTGAACCTAAAATCTTATTCGCAGATGAACCCACAGGTAATTTGGATGCAGCCAACAGCGACAAAATTGAAAAGTTATT
GTTTGAGTTAAATCAAAATTCTAATACTACTCTGGTATTAGTGACTCACGACCCGGTGTTGGCAGGTAGATGTCAGCGTC
AATTACACATGCAAGCGGGTGAGTTAACAGAGGTTTTCTCAAGCACAGCTGTTGAGCAAGCTGCTCTACAGGTGGGTTAG

Protein sequence : 
MTPTTMIKTNGISKTVTTTQGQLQILKPISFEVKAGESIAIVGASGSGKSTLLSLLAGLDEVSEGEIFIDGQAMQNMDEE
QRAQLRGAKVGFIFQSFMLVQSLTALENIMLPAEIAGHDDAKKRALDILQLVGLDHRASHYPNQLSGGEQQRVAIARAFI
SEPKILFADEPTGNLDAANSDKIEKLLFELNQNSNTTLVLVTHDPVLAGRCQRQLHMQAGELTEVFSSTAVEQAALQVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-29 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C427_4005 YP_007545458.1 ABC transporter NC_008702.1.4606598. Protein 1e-31 44
C427_4005 YP_007545458.1 ABC transporter NC_012469.1.7685735. Protein 3e-29 44
C427_4005 YP_007545458.1 ABC transporter NC_012469.1.7686878. Protein 5e-34 42
C427_4005 YP_007545458.1 ABC transporter CP001581.1.gene798.p Protein 4e-29 41