Gene Information

Name : C427_3881 (C427_3881)
Accession : YP_007545334.1
Strain : Glaciecola psychrophila 170
Genome accession: NC_020514
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3725273 - 3726409 bp
Length : 1137 bp
Strand : -
Note : -

DNA sequence :
GTGACTGAATTTTCTAAAATAGATCATCAAATGATGGCCCGCGCTATTCAATTAGCTAAATGCGGTGAATATACCACTTC
TCCTAATCCTAATGTGGGATGTGTTATCAGCGACAGGCAAGGTGTCATTTTAGGCGAAGGCTGGCATAAAAAAGCAGGAG
CGCCTCATGCTGAAGTGCACGCTTTGCAACAAGCTGGTGAGTTTTCCAAGGGTGCTACTGCTTACGTCACTCTAGAGCCT
TGTAGTCATTATGGTAAGACTCCACCTTGTGCTGATGCCTTAATAGAGGCCGGTGTAACTAGGGTCGTGGCGGCTATGGT
TGATCCTAATCCTGTGGTGTCTGGAAAGGGTTTAATTAAGCTACAAGAAGCAGGTATAAAAACCGAACATGGTTTATTGC
AAGCAAGTGCGGAACAACTTAACCGTGGTTTTATTAAACGTATGCGAACAGGTCTACCCTGGGTCACCGTTAAGTTAGCC
GCTAGTTTAGATGGTAAAACGGCTTTAAAAAATGGCATAAGTCAGTGGATTACCGGTCCACAGGCAAGGCAAGATGTACA
AAGACATCGAGCGCGTAGCTGCGCTATTTTATCGGGTTCTGGTACAGTAATAGCAGATAACCCGATGTTGAATGTGCGTT
ATTCTGAGCTTAATTTAAATGATGATGTGTTAGCACAAAAAGACTTGCGACAACCTTTGCGGGTTTTGTTGGACGGACGC
AATCAGTTACCTGCCTCTTTAAATTGTTTGCGATCATTTGAAAACAATCTTGCTGGCAATGTTTTACTTGTTAATGGACA
GCCAAGCGAACACTTATTTGAACAGCATGTGAGTCAATGGCAAGCGCCTTTTATTGGCAATAAGTTAGACTTAAATAAAG
TGATGACCAAGTTAGGTGAGATGCAACTAAATAACATTTGGGTTGAAGCGGGAGGCAAACTCGCCGGTGCGTTGTTACAA
AATAAACTGATTGATGAATTGATTTTATATCAAGCGCCCAAACTTATAGGAGGTGCTGGTCAAAATCTGTTTGACAGCAT
ACCGATTGAAGTAATGGATGAGGTAATTGAGCTTACTTGGACCGATATTAGGCAAGTGGGTAGTGATATTAAAATGACTG
CGCTGATTAATAATTAA

Protein sequence :
MTEFSKIDHQMMARAIQLAKCGEYTTSPNPNVGCVISDRQGVILGEGWHKKAGAPHAEVHALQQAGEFSKGATAYVTLEP
CSHYGKTPPCADALIEAGVTRVVAAMVDPNPVVSGKGLIKLQEAGIKTEHGLLQASAEQLNRGFIKRMRTGLPWVTVKLA
ASLDGKTALKNGISQWITGPQARQDVQRHRARSCAILSGSGTVIADNPMLNVRYSELNLNDDVLAQKDLRQPLRVLLDGR
NQLPASLNCLRSFENNLAGNVLLVNGQPSEHLFEQHVSQWQAPFIGNKLDLNKVMTKLGEMQLNNIWVEAGGKLAGALLQ
NKLIDELILYQAPKLIGGAGQNLFDSIPIEVMDEVIELTWTDIRQVGSDIKMTALINN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-56 46
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-56 46