Gene Information

Name : C427_3733 (C427_3733)
Accession : YP_007545189.1
Strain : Glaciecola psychrophila 170
Genome accession: NC_020514
Putative virulence/resistance : Virulence
Product : resolvase, essential for transposition
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3591811 - 3592368 bp
Length : 558 bp
Strand : -
Note : -

DNA sequence :
ATGAAAGGTCAAAAGATTGGGTATAAGCGAGTCAGTTCATTTGAACAAAATGAAGAAAGGCAATTAGACCAAGAAATTTT
AGATCGTGTTTTTGTTGATAAAGCTTCTGGCAAAGATACCAATCGACCACAACTTAAAGAATTACTATTGTTTGCCAGGG
AAGGGGATGAAGTTGTAGTACATAGCATGGATAGGCTTGCTCGTAATTTGGATGATTTACGCCAAATTGTAAAAGGTTTA
ACGAACAGAGGCATTGGTATTCGTTTTGTTAAAGAAGGCCTAACTTTTACTAATGAAGCTGATTCGCCAATGTCTAACTT
GCTTCTGTCCATGATGGGCGCTTTTGCTGAGTTTGAGCGTTCACTGATTAAAGAACGCCAGAGGGAAGGTATTGAGCTGG
CTAAGAAAAAAGGCATTTACAAAGGGCGTAAACGGTCATTATCAGCCGAAGAGGTTACTGTGTTGATTGAACGAGTTGTT
GCTGGAAGTAACAAAAGTGAATTAGCCAAAGAGTTTGGAATCAGCAGGCAAACTCTTTATTCTTACTTGCAGATTTAG

Protein sequence :
MKGQKIGYKRVSSFEQNEERQLDQEILDRVFVDKASGKDTNRPQLKELLLFAREGDEVVVHSMDRLARNLDDLRQIVKGL
TNRGIGIRFVKEGLTFTNEADSPMSNLLLSMMGAFAEFERSLIKERQREGIELAKKKGIYKGRKRSLSAEEVTVLIERVV
AGSNKSELAKEFGISRQTLYSYLQI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 3e-58 68
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 2e-58 68
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 2e-58 68
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 8e-58 68
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 2e-58 67
res YP_005124341.1 DNA-invertase Not tested Not named Protein 3e-30 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C427_3733 YP_007545189.1 resolvase, essential for transposition VFG1030 Protein 7e-59 68