Gene Information

Name : C427_3438 (C427_3438)
Accession : YP_007544895.1
Strain : Glaciecola psychrophila 170
Genome accession: NC_020514
Putative virulence/resistance : Unknown
Product : polysaccharide biosynthesis/export protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3300984 - 3301844 bp
Length : 861 bp
Strand : -
Note : -

DNA sequence :
GTGTTATCTATTGGCGTTTGGGATCACCCCGAATTATCACTACCCGCTGGAATGCAAAGAACTGCTGCCTTTGACGGTTT
TAGAGTTAAAACAGATGGCACCATCAATTTTGCATATGCAGCTGATATTCCCGCGGCGGATAAAACACTTAAGCAGTTCA
GCGAACTGCTAGTGGAAGAACTTAGCAAGGTGATCCAAAAACCACAGATAGATATTAAAGTGGTTGATTTTAGAAGTCAG
CGTGTCTACGTTACTGGCGAAGTAAAACAACCAGGGGTATTTCCAGTCACTGAAACGCCATTAACCTTAATTGATGCCAT
TAACCAAGCTGGCGGATTAAATGAGCGTGCTAATTGGCGCACGGTTAATTTCACTCGAGATAATCAAGTCCAAATCATCA
AGCTAGATGACTTTTATACTATGGGTGATATCTCTCAAAATCGCTTATTACAACACAATGACATTATTCATATTAATCGC
ATCGATAATCAAAAAGTATTTGTCTTAGGGGATGTAAGTAAAGCCGGTAGCATTGAAATTAATCGTTATGGCCTAAGCCT
TGCTGAAGCACTCAGTGATGTCGGCGGGTTAAATGAAAGCACCGCAAATGCCAATGGCGTGTTTGTATTACGTAAACGAG
CCAACTCTGAAAATGGTGTGTTTGCCGATGTCTATCAGTTGCACGCACAAAATGTGGTCGCCCTGGTATTAGCAGACCAA
TTTAAGCTACAAGCCCGCGATATCGTTTACGTTACCACGGCGCCTATCGCCCGCTGGAATCGCTTAATTAGCCAATTAGT
ACCCACTATTCTATCGTTTGATAAGATACCAGTCATTAAAAGTAATAGCGGTGTACTTTAA

Protein sequence :
MLSIGVWDHPELSLPAGMQRTAAFDGFRVKTDGTINFAYAADIPAADKTLKQFSELLVEELSKVIQKPQIDIKVVDFRSQ
RVYVTGEVKQPGVFPVTETPLTLIDAINQAGGLNERANWRTVNFTRDNQVQIIKLDDFYTMGDISQNRLLQHNDIIHINR
IDNQKVFVLGDVSKAGSIEINRYGLSLAEALSDVGGLNESTANANGVFVLRKRANSENGVFADVYQLHAQNVVALVLADQ
FKLQARDIVYVTTAPIARWNRLISQLVPTILSFDKIPVIKSNSGVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf39 AAO18064.1 Orf39 Not tested TTSS locus Protein 4e-59 46