Gene Information

Name : hemC (C427_0332)
Accession : YP_007541790.1
Strain : Glaciecola psychrophila 170
Genome accession: NC_020514
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 323203 - 324132 bp
Length : 930 bp
Strand : +
Note : -

DNA sequence :
ATGTCAAAACGCATTATCCGGATCGCCACGCGCAAAAGTGCCTTAGCGTTATGGCAAGCTGAGTTCGTTAAAGCGGCTTT
ACTTAACGCGCATAACAATTTACAAATAGAACTTGTGCCGATGAGTACTCAGGGCGACAAGATTTTAGATACCCCTTTAG
CTAAAATTGGTGGTAAAGGTCTATTTATTAAAGAACTAGAAGTGGCGATGACTGAAGGTCGGGCTGATATTGCGGTGCAT
TCTATGAAAGACGTGCCTATCGCTTTCCCCGATGGATTTGGCCTGCATGCTATTTGTGAGCGCGAAAATCCTTTCGATGC
TTTTGTGTCAAATCACTTCAATTCACTCGAAGTGTTACCACTCAATGCAGTGGTCGGTACATCTAGTTTGAGGCGTCAGT
GCCAAATACGCAAAGTCAGACCTGACTTGGTGATTAAGGATTTACGCGGCAATGTGAACACCCGATTGGCTAAGTTAGAT
GCGGGTGGATATGACGCCATTATATTAGCCGCAGCAGGCTTGATCCGACTAGGTATGCGAGAGCGAATCCAGTCTGAGAT
TCAACCTGAAATATCACTTCCAGCTGTGGGGCAGGGTGCCGTAGGCATTGAATGTCGTAATGATGATGCAGAGCTGATTG
CACTATTAGCTCCTTTGAATCACTTTGAAACATCTATTAGGATAAAAGCAGAACGAGCTATGAACACCAAATTAAATGGT
GGTTGCCAAGTGCCTATTGGTAGCTTTGCTGAGTTAGATGAAAAACATATTACGTTACGGGGTTTGGTTGGTTCGGTGGA
TGGTAAGGTGATGTTGTATGCCAAGCACACTGATATTTTAGAAAATGCAGAACAGTTAGGCGAACATGTCGCAGAATTGC
TTCTGGCCCAAGGGGCAGGGGAGATCCTCAGCGCTTTGTATGACGATTAG

Protein sequence :
MSKRIIRIATRKSALALWQAEFVKAALLNAHNNLQIELVPMSTQGDKILDTPLAKIGGKGLFIKELEVAMTEGRADIAVH
SMKDVPIAFPDGFGLHAICERENPFDAFVSNHFNSLEVLPLNAVVGTSSLRRQCQIRKVRPDLVIKDLRGNVNTRLAKLD
AGGYDAIILAAAGLIRLGMRERIQSEIQPEISLPAVGQGAVGIECRNDDAELIALLAPLNHFETSIRIKAERAMNTKLNG
GCQVPIGSFAELDEKHITLRGLVGSVDGKVMLYAKHTDILENAEQLGEHVAELLLAQGAGEILSALYDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 5e-77 63
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 5e-77 63