Gene Information

Name : C427_0319 (C427_0319)
Accession : YP_007541777.1
Strain : Glaciecola psychrophila 170
Genome accession: NC_020514
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 311199 - 313274 bp
Length : 2076 bp
Strand : -
Note : -

DNA sequence :
ATGAAGGGATTAGCACAAACTCCCGTAACCGAGCTAAAAGGTGTGGGCGCCAAAGCTGCAGAAAAATTAGCCAAGCTAGC
AATTGTGTCGGTACAAGACCTACTATTTCATTTGCCTCATAGGTACGAAGACCGCACCCGCATTTATCCCATCTCAGACT
TGCAACCTCACTTACATACCAGTATTCAAGGTGAGGTGATGTCATGTGATATCCAGTTTGGTCGCAGGCGAATGTTAGTT
GTAAGGCTTAGCGATGGAACGGGAACTGTAACGTTACGTTTTTTTCATTTTTCAGCGTCACAAAAAAATAGTCTTGAATC
TGGGGCCACCATTCGTTGTTTTGGTGAAGTGAAAGCGGGCAAATATGGCCTTGAGATCATGCACCCAGAGTATAAATCGA
TTAATCTCGATAATCCCCAAGCCTTGCAAGAATCTCTCACCCCGGTTTACCCCGCTACTGAAGGTATCAAACAGATCACC
TTGCGTAATTTAACCGAGCAAGCGCTAAAACTACTGAGTAAAGGGGGGTTAGCTGAACTATTACCAGAAGGCTTATATCA
ACACCAAATTGGCTTAGTTGACGCTTTACACTTAGTCCACCGGCCACCGCCGGATGTGACCTTATCGTTATTTGAGGAAG
GTAGACACCCCGCCCAGCAACGTTTAATTATAGAGGAGTTATTAGCTCACCACCTCAGTGTGTTAAAGGTCCGTCAACAA
AGTCAGCAACAAGCAACATTCCCAATCAAACCTAATACGTCATTGCTTAATCAATTTTTAAAAAATTTACCCTTCAAACC
CACAGGCGCACAACAGCGAGTAGTGGGCGAAATACAAGATGATATGCAGCAAAATTGCCCGATGATGCGATTAGTACAAG
GCGATGTAGGGTCAGGCAAAACTGTGGTGGCTGCTATGGCGGCATTATCTGCCATCGGCGCAGGTTATCAAGTGGGGCTG
ATGGCACCCACTGAACTATTAGCCGAGCAACATTTCAATAACTTCCGTCAATGGTTTGAACCATTAGGTATCGAAGTCGG
TTGGTTAGCCGGGAAATTAAAAGGTAAAGTCAGAGAAAAAGTATTAGCTCAATTAGCCAACAACGAAGTCAAAATGTTGG
TAGGCACCCATGCCATTTTTCAAGAAGCCGTCACGTTTTCATCATTGGCTTTGGTAGTCGTGGATGAACAGCATCGCTTT
GGTGTGCATCAACGTCTAGCGTTGCGTGAAAAGGGTGAGTCTCAAGGGGCATTTCCTCATCAGTTAATCATGACCGCCAC
CCCTATTCCACGCACATTGGCGATGACCGCTTATGCAGATTTAGATACGTCAATTATTGATGAATTACCACCGGGCAGAA
CACCTGTAAAAACTGTGGTTTTACCCGATGCTCGACGCGATGAGGTAATTACCAGAGTGCGTGACGTAAGCGTTAAGCAA
GGCAGGCAAACCTATTGGGTATGTACACTAATAGATGAATCTGAGTTTTTACAAAGCCAAGCAGCGGAAGATACTGCCAT
TTTATTGCGAACAGCATTACCAGAACTGAAAGTAGGTTTAGTACATGGCAGACTAAAATCTAATGAAAAACAACAAATTA
TGGCTGACTTTAAAGCAGGTGCCTTAGACTTATTGGTAGCAACCACTGTGATTGAAGTAGGTGTTGATGTGCCCAATGCC
AGCCTGATGATTATCGAAAATCCAGAACGTTTAGGGCTGGCGCAATTGCACCAATTACGTGGGCGTGTAGGTCGAGGCTC
AATAGAAAGCCATTGCGTTTTAATGTACCAAAGCCCTTTGTCTAAAACGGCTAACAAACGTTTGGCTGTTCTTAGGGAGT
CCAACGACGGATTTTATATCGCTCAACAGGATTTAGAAATTCGCGGACCAGGAGAGCTTTTAGGCACCAAACAAACTGGG
TTAGCTGATTTAAAGATTGCAGATCTGATGCGTGATGCAGAGCTCATACCTCAAGTTCAAAATATTGCTAACCACCTATG
GGATCAATACCCATCAAACGCCCAAGCAATAGTGAATCGCTGGTTAAGTAACAAAGAGCACTTTGGTCATGCGTAA

Protein sequence :
MKGLAQTPVTELKGVGAKAAEKLAKLAIVSVQDLLFHLPHRYEDRTRIYPISDLQPHLHTSIQGEVMSCDIQFGRRRMLV
VRLSDGTGTVTLRFFHFSASQKNSLESGATIRCFGEVKAGKYGLEIMHPEYKSINLDNPQALQESLTPVYPATEGIKQIT
LRNLTEQALKLLSKGGLAELLPEGLYQHQIGLVDALHLVHRPPPDVTLSLFEEGRHPAQQRLIIEELLAHHLSVLKVRQQ
SQQQATFPIKPNTSLLNQFLKNLPFKPTGAQQRVVGEIQDDMQQNCPMMRLVQGDVGSGKTVVAAMAALSAIGAGYQVGL
MAPTELLAEQHFNNFRQWFEPLGIEVGWLAGKLKGKVREKVLAQLANNEVKMLVGTHAIFQEAVTFSSLALVVVDEQHRF
GVHQRLALREKGESQGAFPHQLIMTATPIPRTLAMTAYADLDTSIIDELPPGRTPVKTVVLPDARRDEVITRVRDVSVKQ
GRQTYWVCTLIDESEFLQSQAAEDTAILLRTALPELKVGLVHGRLKSNEKQQIMADFKAGALDLLVATTVIEVGVDVPNA
SLMIIENPERLGLAQLHQLRGRVGRGSIESHCVLMYQSPLSKTANKRLAVLRESNDGFYIAQQDLEIRGPGELLGTKQTG
LADLKIADLMRDAELIPQVQNIANHLWDQYPSNAQAIVNRWLSNKEHFGHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 2e-99 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C427_0319 YP_007541777.1 ATP-dependent DNA helicase RecG BAC0356 Protein 0.0 59