Gene Information

Name : C427_3064 (C427_3064)
Accession : YP_007544521.1
Strain : Glaciecola psychrophila 170
Genome accession: NC_020514
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2920181 - 2920492 bp
Length : 312 bp
Strand : -
Note : -

DNA sequence :
ATGAGTAAAAGAACAAGACGGACATTTAGTCCTGAATTCAGATTAGAAACAGCCCAATTAATTGTCGATCAAGGTTACAC
GCATGACGAAGCAGCTAAAGCCATGGGAGTGGGGTTTTCAACCATTGGCAAATGGGTGAAACAACTTCAACAAGAGCGCC
AAGGTGTGCGTGTGAAGCCAACACCCATGACGCCAGAACAGCTTGAAATTCGTGAGTTGAAGAAGCGTAATGAACGACTT
GAATTGGAAAAGGAGATTATAAAAAAGGCTACCGCTCTGTTGATGTCGGACTCCATGAACAACTCTCGGTAA

Protein sequence :
MSKRTRRTFSPEFRLETAQLIVDQGYTHDEAAKAMGVGFSTIGKWVKQLQQERQGVRVKPTPMTPEQLEIRELKKRNERL
ELEKEIIKKATALLMSDSMNNSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orfA AGK06911.1 IS1359 transposase; OrfA Not tested SGI1 Protein 2e-19 68
unnamed AGK06948.1 IS1359 transposase; OrfA Not tested SGI1 Protein 2e-19 68
orfA AGK06994.1 IS1359 transposase; OrfA Not tested SGI1 Protein 2e-19 68
orfA AGK07052.1 IS1359 transposase; OrfA Not tested SGI1 Protein 2e-19 68
VC1790 NP_231425.1 transposase OrfAB subunit A Not tested VPI-2 Protein 3e-19 68
orfA ACX47959.1 IS1359 transposase; OrfA Not tested SGI1 Protein 2e-19 68
orfA YP_001217330.1 transposase OrfAB subunit A Not tested VPI-2 Protein 3e-19 68
VPI2_0009c ACA01826.1 transposase OrfAB subunit A Not tested VPI-2 Protein 2e-19 68
insN YP_002152325.1 transposase for insertion sequence element IS911 Not tested Not named Protein 1e-16 66
l7045 CAD33744.1 - Not tested PAI I 536 Protein 2e-17 64
orfA CAE85179.1 OrfA protein, IS911 Not tested PAI V 536 Protein 2e-17 64
ECO111_3778 YP_003236113.1 putative IS602 transposase OrfA Not tested LEE Protein 4e-19 61
aec66 AAW51749.1 Aec66 Not tested AGI-3 Protein 3e-19 61
unnamed CAD42034.1 hypothetical protein Not tested PAI II 536 Protein 1e-15 60
RS05 AAP82950.1 putative transposase Not tested PAPI-2 Protein 7e-16 55
unnamed ACU09431.1 IS911 transposase orfA Not tested LEE Protein 4e-18 54
Z5088 NP_290240.1 hypothetical protein Not tested LEE Protein 5e-18 54
ECs4535 NP_312562.1 hypothetical protein Not tested LEE Protein 5e-18 54
unnamed AAC31483.1 L0004 Not tested LEE Protein 3e-18 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C427_3064 YP_007544521.1 transposase IS3/IS911 family protein VFG1123 Protein 9e-20 68
C427_3064 YP_007544521.1 transposase IS3/IS911 family protein VFG1485 Protein 6e-18 64
C427_3064 YP_007544521.1 transposase IS3/IS911 family protein VFG1553 Protein 4e-16 60
C427_3064 YP_007544521.1 transposase IS3/IS911 family protein VFG0784 Protein 1e-18 54