Gene Information

Name : C427_0282 (C427_0282)
Accession : YP_007541740.1
Strain : Glaciecola psychrophila 170
Genome accession: NC_020514
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 265007 - 265486 bp
Length : 480 bp
Strand : -
Note : -

DNA sequence :

ATGAAAGAGGTAGGACTCGTCAGCACACACCCCAGAAAACTAGCTAAAAATAGCGAAAATGAATCGAAAATTGCGCCTAA
TTTACTCAAACGGCAATTTAATGTTGAAGATAAAAATCAGGTCTGTTGCGTTGGTGTCACCTATCTTTGGTCTGGAACAC
AGTGGTTATATTTAGCCGTATTTATGGACTTATTCGCTAGGAAAATAGTGGGTAGGGCCTGTGTAGACAGTACTAATACC
GACTTGATCTGTGCAGCATTACGAATAGCTTTTGAGACCCGAAGACGCCCAAAAATCTTAATTCTTTATTCAGACCAAAG
CTGTCACTACATGAGTCTTCAATACCGACAAATGCTCTGGAAATATCAAATTCCCCAAAGTATAAGTCGACGCGGCAACT
GTTGGGATAATGCGGTAATGGAACGTTCTTTTAGAAGGGCATATTCAAGTCTGAAGTGCATAACCTCTAAGCAGCTATAG

Protein sequence :

MKEVGLVSTHPRKLAKNSENESKIAPNLLKRQFNVEDKNQVCCVGVTYLWSGTQWLYLAVFMDLFARKIVGRACVDSTNT
DLICAALRIAFETRRRPKILILYSDQSCHYMSLQYRQMLWKYQIPQSISRRGNCWDNAVMERSFRRAYSSLKCITSKQL

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
l0006	CAD33765.1	L0006 protein	Not tested	PAI I 536	Protein	5e-27	47

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
C427_0282	YP_007541740.1	integrase catalytic subunit	VFG1506	Protein	2e-27	47