Gene Information

Name : C427_2766 (C427_2766)
Accession : YP_007544223.1
Strain : Glaciecola psychrophila 170
Genome accession: NC_020514
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2614664 - 2615377 bp
Length : 714 bp
Strand : -
Note : -

DNA sequence : 
ATGTTAAAAATGACAGACGTAAAAAAGGTATTTCGTACCGATTTAGTCGAAACTCATGCATTGCGGGATTTTAACTTGCA
TGTGGGTGAAGGTGACTTTGTGGCGGTGACTGGCCCTTCAGGGTCGGGCAAAACGACATTTTTAAATATCGCAGGCCTCC
TCGAAACATTTAATGGCGGCACCTACGAACTAGACGGCCAAGATGTCAGTAATTTAAATGATAAAAAACGCAGTCAACTC
AGAAACGAAAAAATTGGTTTTATTTTCCAAAGCTTTAATTTGATCCCCGATCTCAATTTGTTCGATAACGTCGACGTACC
CTTACGTTATCGAGGTTTTAACAGCGCTGAACGTAAAAAACGTATCGAAAACAGCTTAGAAATGGTGGGGCTAGCGCAAC
GTATGAAACACCTACCCTCGCAACTTTCTGGTGGACAACAACAACGCGTCGCGATTGCCAGAGCACTTGCAGGCGAGCCT
CGCTTTTTGTTAGCGGATGAGCCAACGGGTAATTTAGACACCCAGATGGCTAACAGTGTTCTGGACTTATTAAAAAGCAT
TAACGCTGCTGGCACCACTATTATCATGGTGACTCATGATGAAAATTTAGCGAAGCAGGCTAGGCGCAATATTTATGTGC
GTGATGGTAAGGTCAGTGAGATTAATGATGTTGATGTTGATATCGCTATGCCAACGCAGCTTGCTGCCGTTTAA

Protein sequence : 
MLKMTDVKKVFRTDLVETHALRDFNLHVGEGDFVAVTGPSGSGKTTFLNIAGLLETFNGGTYELDGQDVSNLNDKKRSQL
RNEKIGFIFQSFNLIPDLNLFDNVDVPLRYRGFNSAERKKRIENSLEMVGLAQRMKHLPSQLSGGQQQRVAIARALAGEP
RFLLADEPTGNLDTQMANSVLDLLKSINAAGTTIIMVTHDENLAKQARRNIYVRDGKVSEINDVDVDIAMPTQLAAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 42
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 2e-27 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-35 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-35 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C427_2766 YP_007544223.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-50 48
C427_2766 YP_007544223.1 ABC transporter-like protein NC_008702.1.4606598. Protein 6e-45 47
C427_2766 YP_007544223.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-36 44